RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 PCMTD1Q96MG8 357 aaPredicted RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 ERGIC2Q96RQ1 377 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 ZNHIT6Q9NWK9 470 aaKnown RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 CDC23Q9UJX2 597 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 ABL1P00519 1130 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 USP11P51784 963 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 ZBED6P86452 979 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 ECM1Q16610 540 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 HYIQ5T013 277 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 TMCO3Q6UWJ1 677 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 GJA10Q969M2 543 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 IQCDQ96DY2 449 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 ANO3Q9BYT9 981 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 AGPAT5Q9NUQ2 364 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 EHHADHQ08426 723 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 AP3B2Q13367 1082 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 BMS1Q14692 1282 aaKnown RBP15.42■□□□□ 0.06
PRAME-202ENST00000398743 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 FIGNQ5HY92 759 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 SRGAP1Q7Z6B7 1085 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 RABGGTAQ92696 567 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 NAPGQ99747 312 aaPredicted RBP15.42■□□□□ 0.06
PRAME-202ENST00000398743 PRDM10Q9NQV6 1147 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 FAM53CQ9NYF3 392 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 REXO2Q9Y3B8 237 aaKnown RBP15.42■□□□□ 0.06
PRAME-202ENST00000398743 ABCB11O95342 1321 aa15.42■□□□□ 0.06
PRAME-202ENST00000398743 A0A1W2PQJ5 194 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 F5H6K3 240 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 GDF11O95390 407 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 KLK7P49862 253 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 KRT83P78385 493 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 KLRC3Q07444 240 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 VWA3BQ502W6 1294 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 SIAH1Q8IUQ4 282 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 GMCL1P1Q8NEA9 526 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 CNKSR1Q969H4 720 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 KCNMB3Q9NPA1 279 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 BMP2KQ9NSY1 1161 aaPredicted RBP15.41■□□□□ 0.06
PRAME-202ENST00000398743 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
PRAME-202ENST00000398743 CHMP4BP1P59074 171 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 AOC3Q16853 763 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 MCTP2Q6DN12 878 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 TSG101Q99816 390 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 AMNQ9BXJ7 453 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 HAUS4Q9H6D7 363 aa15.41■□□□□ 0.06
PRAME-202ENST00000398743 CYP3A7-CYP3A51PA0A087WV96 503 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 MEIS2O14770 477 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 SLC26A4O43511 780 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 CYP3A7P24462 503 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 COASYQ13057 564 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 MAN2A1Q16706 1144 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 MOXD1Q6UVY6 613 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 SLFN12Q8IYM2 578 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 DNAJC19Q96DA6 116 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 EPC1Q9H2F5 836 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 NDST4Q9H3R1 872 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
PRAME-202ENST00000398743 ATRNL1Q5VV63 1379 aa15.4■□□□□ 0.06
PRAME-202ENST00000398743 NKRFO15226 690 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRAME-202ENST00000398743 ENTPD3O75355 529 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 IPO7O95373 1038 aaKnown RBP15.39■□□□□ 0.05
PRAME-202ENST00000398743 ZSCAN20P17040 1043 aaPredicted RBP15.39■□□□□ 0.05
PRAME-202ENST00000398743 CHRNA5P30532 468 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 IKQ13123 557 aaPredicted RBP15.39■□□□□ 0.05
PRAME-202ENST00000398743 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
PRAME-202ENST00000398743 CCDC170Q8IYT3 715 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 MYOCDQ8IZQ8 938 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 MBOAT7Q96N66 472 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 KIAA1024Q9UPX6 916 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 SCN9AQ15858 1988 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.051e-10■■■□□ 15.8
PRAME-202ENST00000398743 NDUFB10O96000 172 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 SSBP05455 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRAME-202ENST00000398743 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.05
PRAME-202ENST00000398743 PANK4Q9NVE7 773 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 FHOD1Q9Y613 1164 aa15.39■□□□□ 0.05
PRAME-202ENST00000398743 ZNF646O15015 1829 aaPredicted RBP15.38■□□□□ 0.05
PRAME-202ENST00000398743 HERVK_113P62684 666 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 TUBB4BP68371 445 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 ARHGAP4P98171 946 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CDK17Q00537 523 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 LRRC41Q15345 812 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 FAM26FQ5R3K3 315 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
PRAME-202ENST00000398743 HAUS3Q68CZ6 603 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 ZNF662Q6ZS27 426 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 LRRC55Q6ZSA7 311 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
PRAME-202ENST00000398743 FBXO11Q86XK2 927 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 GLIS3Q8NEA6 775 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CRYGNQ8WXF5 182 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 PUF60Q9UHX1 559 aaKnown RBP15.38■□□□□ 0.05
PRAME-202ENST00000398743 MYH7BA7E2Y1 1941 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms