RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 DDAH1O94760 285 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 CD4P01730 458 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 MYL3P08590 195 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 EIF2AK2P19525 551 aaKnown RBP15.54■□□□□ 0.08
VCX3A-202ENST00000398729 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
VCX3A-202ENST00000398729 GHRHRQ02643 423 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 SLC35G1Q2M3R5 365 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 RNF20Q5VTR2 975 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 NFXL1Q6ZNB6 911 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 SEPT14Q6ZU15 432 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 ZNF654Q8IZM8 581 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 PXMP2Q9NR77 195 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
VCX3A-202ENST00000398729 CCDC69A6NI79 296 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 KPNA6O60684 536 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 CDC45O75419 566 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 ARIH2O95376 493 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 CYP2C18P33260 490 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 PSMC6P62333 389 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 CCDC85BQ15834 202 aaPredicted RBP15.53■□□□□ 0.08
VCX3A-202ENST00000398729 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 COPS5Q92905 334 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 GAS2L1Q99501 681 aaPredicted RBP15.53■□□□□ 0.08
VCX3A-202ENST00000398729 MTG1Q9BT17 334 aaPredicted RBP15.53■□□□□ 0.08
VCX3A-202ENST00000398729 PPP1R12CQ9BZL4 782 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 KIAA1217Q5T5P2 1943 aa15.53■□□□□ 0.08
VCX3A-202ENST00000398729 BAZ2BQ9UIF8 2168 aaKnown RBP15.52■□□□□ 0.08
VCX3A-202ENST00000398729 A6NJR5 290 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 GCOM1H8Y6P7 765 aaPredicted RBP15.52■□□□□ 0.08
VCX3A-202ENST00000398729 SH2B2O14492 632 aaPredicted RBP15.52■□□□□ 0.08
VCX3A-202ENST00000398729 EIF3JO75822 258 aaKnown RBP15.52■□□□□ 0.08
VCX3A-202ENST00000398729 NR3C2P08235 984 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 POLR2MP0CAP2 368 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 SMARCA1P28370 1054 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 HOXA13P31271 388 aaPredicted RBP15.52■□□□□ 0.08
VCX3A-202ENST00000398729 LIFRP42702 1097 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 GNAQP50148 359 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 TMEM199Q8N511 208 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 HERVK_113Q902F9 699 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 LZTS2Q9BRK4 669 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 MYL10Q9BUA6 226 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.08
VCX3A-202ENST00000398729 YBX2Q9Y2T7 364 aaKnown RBP15.52■□□□□ 0.08
VCX3A-202ENST00000398729 B4GALT4O60513 344 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 GH1P01241 217 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 CALM1P0DP23 149 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 CALM2P0DP24 149 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 CALM3P0DP25 149 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 MRPS5P82675 430 aaKnown RBP15.51■□□□□ 0.07
VCX3A-202ENST00000398729 LY6KQ17RY6 165 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 ADAMTS19Q8TE59 1207 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 PIBF1Q8WXW3 757 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 VWCEQ96DN2 955 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
VCX3A-202ENST00000398729 PDCD2LQ9BRP1 358 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 TRPV6Q9H1D0 765 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 ALDH8A1Q9H2A2 487 aaPredicted RBP15.51■□□□□ 0.07
VCX3A-202ENST00000398729 HIPK3Q9H422 1215 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 IL23AQ9NPF7 189 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 THEGQ9P2T0 379 aa15.51■□□□□ 0.07
VCX3A-202ENST00000398729 SEC63Q9UGP8 760 aaKnown RBP15.51■□□□□ 0.07
VCX3A-202ENST00000398729 UMODL1Q5DID0 1318 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 SUPT20HL2P0C7V6 817 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 MYCLP12524 364 aaPredicted RBP15.5■□□□□ 0.07
VCX3A-202ENST00000398729 PSRC1Q6PGN9 363 aaPredicted RBP15.5■□□□□ 0.07
VCX3A-202ENST00000398729 FCHSD1Q86WN1 690 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 AFG1LQ8WV93 481 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 NEK1Q96PY6 1258 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
VCX3A-202ENST00000398729 SLC12A7Q9Y666 1083 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 MRVI1Q9Y6F6 885 aa15.5■□□□□ 0.07
VCX3A-202ENST00000398729 FGBP02675 491 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 MMP3P08254 477 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 IGFBP4P22692 258 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 ARHGAP1Q07960 439 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 COL9A3Q14050 684 aaPredicted RBP15.49■□□□□ 0.07
VCX3A-202ENST00000398729 PGM5Q15124 567 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 KCNV1Q6PIU1 500 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 VSIG10LQ86VR7 867 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 UHRF1Q96T88 793 aaPredicted RBP15.49■□□□□ 0.07
VCX3A-202ENST00000398729 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 MSRAQ9UJ68 235 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 SCN10AQ9Y5Y9 1956 aa15.49■□□□□ 0.07
VCX3A-202ENST00000398729 PRRC2BQ5JSZ5 2229 aaKnown RBP15.48■□□□□ 0.07
VCX3A-202ENST00000398729 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 BMP1P13497 986 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 RXRAP19793 462 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 CCND2P30279 289 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 LAMC2Q13753 1193 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 KRT32Q14532 448 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 NBPF20Q3BBV1 942 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 NFRKBQ6P4R8 1299 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 SYNE3Q6ZMZ3 975 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 OTOP2Q7RTS6 562 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 SGMS1Q86VZ5 419 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 SRBD1Q8N5C6 995 aaKnown RBP15.48■□□□□ 0.07
VCX3A-202ENST00000398729 CUL5Q93034 780 aa15.48■□□□□ 0.07
VCX3A-202ENST00000398729 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms