RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 CCDC50Q8IVM0 306 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 ENAHQ8N8S7 591 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 MAGEC3Q8TD91 643 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 LY9Q9HBG7 655 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 GGA2Q9UJY4 613 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 GAKO14976 1311 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 TNKSO95271 1327 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 KIAA1551Q9HCM1 1747 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 PDE2AO00408 941 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 HSF2BPO75031 334 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 DDNO94850 711 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 NDUFA10O95299 355 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 LDHCP07864 332 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 CDC25AP30304 524 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 GRIK3Q13003 919 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 GRIPAP1Q4V328 841 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 KLHL10Q6JEL2 608 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 TSEN2Q8NCE0 465 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 HINFPQ9BQA5 517 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 ATP8A2Q9NTI2 1148 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 GMPSP49915 693 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 PPP4CP60510 307 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 IFT88Q13099 833 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZKSCAN8Q15776 578 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 IQCEQ6IPM2 695 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 SH2D3CQ8N5H7 860 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCDC114Q96M63 670 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 CHP1Q99653 195 aa11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 ANGEL1Q9UNK9 670 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-205ENST00000398661 KLHL33A6NCF5 533 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 SH2B2O14492 632 aaPredicted RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZNF185O15231 689 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 GDF11O95390 407 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCNHP51946 323 aaPredicted RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 INHBEP58166 350 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CUL4BQ13620 913 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 TRIM14Q14142 442 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 PTGISQ16647 500 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CYB5D1Q6P9G0 228 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 OGFOD1Q8N543 542 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 SPATA20Q8TB22 786 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 RUBCNQ92622 972 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 DNAJC18Q9H819 358 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 ACTR5Q9H9F9 607 aaPredicted RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 MKI67P46013 3256 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 MPHOSPH10O00566 681 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 KRT9P35527 623 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCT6AP40227 531 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CDK8P49336 464 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 EPHB4P54760 987 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 JAG1P78504 1218 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 GUCY1A3Q02108 690 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 GRIN1Q05586 938 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 NNTQ13423 1086 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCDC122Q5T0U0 273 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 APOA5Q6Q788 366 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 NLRP14Q86W24 1093 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 MMGT1Q8N4V1 131 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
HMGCLL1-205ENST00000398661 WNT10BO00744 389 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 ACTN4O43707 911 aaKnown RBP11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 GUCY1A2P33402 732 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 EPS15P42566 896 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 HERVK_113P62684 666 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 NAA25Q14CX7 972 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 KCTD16Q68DU8 428 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 FUKQ8N0W3 1084 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 MYCBPAPQ8TBZ2 947 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 HDAC7Q8WUI4 952 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 SCLT1Q96NL6 688 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZIM3Q96PE6 472 aa11.21□□□□□ -0.61
HMGCLL1-205ENST00000398661 GMLQ99445 158 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms