RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 WHAMMQ8TF30 809 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 CASKIN2Q8WXE0 1202 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 GGA2Q9UJY4 613 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 SRRM3A6NNA2 597 aaPredicted RBP19.17■□□□□ 0.66
EWSR1-206ENST00000397938 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
EWSR1-206ENST00000397938 MDH1P40925 334 aaKnown RBP19.17■□□□□ 0.66
EWSR1-206ENST00000397938 HGSNATQ68CP4 663 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 NLRP14Q86W24 1093 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 MYCBPAPQ8TBZ2 947 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 SLC39A2Q9NP94 309 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 BCL9O00512 1426 aa19.17■□□□□ 0.66
EWSR1-206ENST00000397938 GRID2IPA4D2P6 1211 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 CYP2D6P10635 497 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 GUCY2FP51841 1108 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 CCT8L2Q96SF2 557 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 CXorf56Q9H5V9 222 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 EDEM3Q9BZQ6 932 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
EWSR1-206ENST00000397938 STXBP3O00186 592 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 HDLBPQ00341 1268 aaKnown RBP19.15■□□□□ 0.66
EWSR1-206ENST00000397938 ITGB3BPQ13352 177 aaPredicted RBP19.15■□□□□ 0.66
EWSR1-206ENST00000397938 GRM4Q14833 912 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 SLC35G1Q2M3R5 365 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 BARHL2Q9NY43 387 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 ARPP21Q9UBL0 812 aaPredicted RBP19.15■□□□□ 0.66
EWSR1-206ENST00000397938 FGFR1OPO95684 399 aaKnown RBP19.15■□□□□ 0.66
EWSR1-206ENST00000397938 FAM107AO95990 144 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 SEC24CP53992 1094 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 PLCB4Q15147 1175 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 HEATR3Q7Z4Q2 680 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 PNMA1Q8ND90 353 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 KRT12Q99456 494 aa19.15■□□□□ 0.66
EWSR1-206ENST00000397938 CRNKL1Q9BZJ0 848 aaKnown RBP19.15■□□□□ 0.66
EWSR1-206ENST00000397938 ATP2B2Q01814 1243 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 ACTN3Q08043 901 aaPredicted RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 TDRD12Q587J7 1177 aaKnown RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 TMED8Q6PL24 325 aaPredicted RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 CACNA2D4Q7Z3S7 1137 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 INPP4AQ96PE3 977 aaPredicted RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 PALMO75781 387 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 HSPA9P38646 679 aaKnown RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 GNAQP50148 359 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 SBK1Q52WX2 424 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 NSUN4Q96CB9 384 aaKnown RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 MMTAG2Q9BU76 263 aaKnown RBP19.14■□□□□ 0.65
EWSR1-206ENST00000397938 ATP8A2Q9NTI2 1148 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 MAD2L2Q9UI95 211 aa19.14■□□□□ 0.65
EWSR1-206ENST00000397938 ATP6V1AP38606 617 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 EVA1CP58658 441 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 CDC37Q16543 378 aaPredicted RBP19.13■□□□□ 0.65
EWSR1-206ENST00000397938 ARHGAP27Q6ZUM4 889 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 DGKHQ86XP1 1220 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 WTIPA6NIX2 430 aaPredicted RBP19.13■□□□□ 0.65
EWSR1-206ENST00000397938 UBE4AQ14139 1066 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 PARP10Q53GL7 1025 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 RNF187Q5TA31 235 aaPredicted RBP19.13■□□□□ 0.65
EWSR1-206ENST00000397938 PPP4R3AQ6IN85 833 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 LRRC55Q6ZSA7 311 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 UNC13DQ70J99 1090 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 GUF1Q8N442 669 aaKnown RBP19.13■□□□□ 0.65
EWSR1-206ENST00000397938 TMBIM4Q9HC24 238 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 PLAAQ9Y263 795 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
EWSR1-206ENST00000397938 CYTH3O43739 400 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 CCNT1O60563 726 aaKnown RBP19.12■□□□□ 0.65
EWSR1-206ENST00000397938 ADAMTS2O95450 1211 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 FTCDO95954 541 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 MYBP10242 640 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 SMTNP53814 917 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 LRRC63Q05C16 580 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 NAB2Q15742 525 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 C6orf89Q6UWU4 347 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 RPAINQ86UA6 219 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 IL17RBQ9NRM6 502 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 NTSR2O95665 410 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 DNA2P51530 1060 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 DRP2Q13474 957 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 LETM2Q2VYF4 491 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 CEP85LQ5SZL2 805 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 MEI1Q5TIA1 1274 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 MAATS1Q7Z4T9 603 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 CCDC13Q8IYE1 715 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 ANKS1AQ92625 1134 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 CALML4Q96GE6 196 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 JPH2Q9BR39 696 aaPredicted RBP19.12■□□□□ 0.65
EWSR1-206ENST00000397938 LUC7LQ9NQ29 371 aaKnown RBP19.12■□□□□ 0.65
EWSR1-206ENST00000397938 PCDHGC5Q9Y5F6 944 aa19.12■□□□□ 0.65
EWSR1-206ENST00000397938 E7EVH7 732 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 RAD51CO43502 376 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 TECP42680 631 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 MECOMQ03112 1051 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 KCNMA1Q12791 1236 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 IFT88Q13099 833 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 TRADDQ15628 312 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 LRIG3Q6UXM1 1119 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 SV2BQ7L1I2 683 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms