RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MARCH6O60337 910 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L24Q0WX57 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L6PQ6QN14 398 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HHIPL2Q6UWX4 724 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MYH4Q9Y623 1939 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ENC1O14682 589 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NOP2P46087 812 aaKnown RBP20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 GPATCH4Q5T3I0 446 aaKnown RBP20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PPP4R3AQ6IN85 833 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MYO1AQ9UBC5 1043 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MYH7BA7E2Y1 1941 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PPP1R2P41236 205 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MMP14P50281 582 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MRPL12P52815 198 aaKnown RBP20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MEA1Q16626 185 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CCDC122Q5T0U0 273 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ANKZF1Q9H8Y5 726 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PVALEFA0A1B0GWK0 134 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 GTF2A1P52655 376 aaPredicted RBP20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZSCAN29Q8IWY8 852 aaPredicted RBP20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NHEJ1Q9H9Q4 299 aaPredicted RBP20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ARFGAP3Q9NP61 516 aa20.41■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 RBM5P52756 815 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 COBLL1Q53SF7 1204 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NCAPH2Q6IBW4 605 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NEK11Q8NG66 645 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZNF622Q969S3 477 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NUP58Q9BVL2 599 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MYO3BQ8WXR4 1341 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 DDTLA6NHG4 134 aaPredicted RBP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZBED6P86452 979 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 FKBP15Q5T1M5 1219 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 GPIHBP1Q8IV16 184 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HAUS4Q9H6D7 363 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HDAC6Q9UBN7 1215 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PCDHA12Q9UN75 941 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 QSER1Q2KHR3 1735 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 RCCD1A6NED2 376 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 SSBP05455 408 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MMP10P09238 476 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 EEF2P13639 858 aaKnown RBP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CYP27A1Q02318 531 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 TMEM119Q4V9L6 283 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PNKPQ96T60 521 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZNHIT6Q9NWK9 470 aaKnown RBP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZNF219Q9P2Y4 722 aaPredicted RBP20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 MYO6Q9UM54 1294 aa20.4■□□□□ 0.86
CHRFAM7A-202ENST00000397827 EPHB6O15197 1021 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 RHOXF2BP0C7M4 288 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 AMPD2Q01433 879 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 QRICH1Q2TAL8 776 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MSL1Q68DK7 614 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 KIAA1328Q86T90 577 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 C10orf67Q8IYJ2 551 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 RETREG2Q8NC44 543 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ERGIC2Q96RQ1 377 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 RHOXF2Q9BQY4 288 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 LACRTQ9GZZ8 138 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TMX4Q9H1E5 349 aaPredicted RBP20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 FAM207AQ9NSI2 230 aaPredicted RBP20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PLEKP08567 350 aaPredicted RBP20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PSEN1P49768 467 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 GUF1Q8N442 669 aaKnown RBP20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MTMR8Q96EF0 704 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 NDST4Q9H3R1 872 aa20.39■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SLC1A4P43007 532 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SNAP25P60880 206 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 VWA3BQ502W6 1294 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PCDHA1Q9Y5I3 950 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 DUSP10Q9Y6W6 482 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 GYS2P54840 703 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TUBB2AQ13885 445 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TUBB2BQ9BVA1 445 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TBC1D7Q9P0N9 293 aa20.38■□□□□ 0.85
CHRFAM7A-202ENST00000397827 BRWD3Q6RI45 1802 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CTAGE15A4D2H0 777 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TRIM66O15016 1216 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CTAGE8P0CG41 777 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CYLC1P35663 651 aaPredicted RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 KRT83P78385 493 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CERKLQ49MI3 558 aaPredicted RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CTAGE6Q86UF2 777 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CTAGE4Q8IX94 777 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 DHX37Q8IY37 1157 aaKnown RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 JAKMIP2Q96AA8 810 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ATF5Q9Y2D1 282 aaPredicted RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 E9PMD0 336 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ATP1A1P05023 1023 aaKnown RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PDE6BP35913 854 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CACNB1Q02641 598 aaPredicted RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 EHHADHQ08426 723 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 WHAMMP3Q1A5X7 153 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SH3BP5LQ7L8J4 393 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 KRT26Q7Z3Y9 468 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 NOA1Q8NC60 698 aaKnown RBP20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 DNAJC19Q96DA6 116 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms