RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SLC10A3P09131 477 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 CEP55Q53EZ4 464 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 SLFN12Q8IYM2 578 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 FAM43AQ8N2R8 423 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 PAGR1Q9BTK6 254 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 TNMDQ9H2S6 317 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 ZCCHC17Q9NP64 241 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 MANSC4A6NHS7 340 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 MEIS1O00470 390 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 CYP2C8P10632 490 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 HTRA3P83110 453 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 PRR16Q569H4 304 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 XRRA1Q6P2D8 792 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 NIPA1Q7RTP0 329 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 SHCBP1Q8NEM2 672 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 FAM20AQ96MK3 541 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 PXMP2Q9NR77 195 aa22.02■■□□□ 1.12
PDLIM2-205ENST00000397761 A0A087X0B3 334 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 BCRP11274 1271 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 TXKP42681 527 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 GCLCP48506 637 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 ERVK-9P63128 1117 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 ERVK-24P63145 666 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 GSE1Q14687 1217 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 PGM5Q15124 567 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 TMEM266Q2M3C6 531 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 KRBA2Q6ZNG9 492 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 IL31RAQ8NI17 732 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 CYP2W1Q8TAV3 490 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 RMDN3Q96TC7 470 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 PDCD2LQ9BRP1 358 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 PYM1Q9BRP8 204 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 TTC12Q9H892 705 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 MORF4L1Q9UBU8 362 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 USP25Q9UHP3 1055 aa22.01■■□□□ 1.11
PDLIM2-205ENST00000397761 FAM155AB1AL88 458 aaPredicted RBP22■■□□□ 1.11
PDLIM2-205ENST00000397761 MSH4O15457 936 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 POLR2DO15514 142 aaKnown RBP22■■□□□ 1.11
PDLIM2-205ENST00000397761 ZNF76P36508 570 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 TECP42680 631 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 UBXN2AP68543 259 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 SETQ01105 290 aaPredicted RBP22■■□□□ 1.11
PDLIM2-205ENST00000397761 E2F4Q16254 413 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 CAMK4Q16566 473 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 Q3C1V9 767 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 LONRF3Q496Y0 759 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 LRSAM1Q6UWE0 723 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 DNAJC5GQ8N7S2 189 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 MXRA8Q9BRK3 442 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 RAB34Q9BZG1 259 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 UBIAD1Q9Y5Z9 338 aa22■■□□□ 1.11
PDLIM2-205ENST00000397761 MCM3APO60318 1980 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 TMEM88BA6NKF7 163 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 ACTN4O43707 911 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 ERCC3P19447 782 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 MRPS9P82933 396 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 NSUN6Q8TEA1 469 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 CCDC102AQ96A19 550 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 PARK7Q99497 189 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 FUCA2Q9BTY2 467 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 MROH8Q9H579 483 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 PCDHA12Q9UN75 941 aa21.99■■□□□ 1.11
PDLIM2-205ENST00000397761 ZNF236Q9UL36 1845 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 ITGB5P18084 799 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 TXLNAP40222 546 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 SPIRE1Q08AE8 756 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 VSIG10LQ86VR7 867 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 NCAPG2Q86XI2 1143 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 PLA2G4DQ86XP0 818 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 DNERQ8NFT8 737 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 SMCR8Q8TEV9 937 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 SLC5A5Q92911 643 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 PURBQ96QR8 312 aaKnown RBP21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 SDF4Q9BRK5 362 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 MMTAG2Q9BU76 263 aaKnown RBP21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 ADGRA2Q96PE1 1338 aa21.98■■□□□ 1.11
PDLIM2-205ENST00000397761 LOXHD1Q8IVV2 1947 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 PP2D1A8MPX8 630 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 SLFN14P0C7P3 912 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 EIF2AK2P19525 551 aaKnown RBP21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 UBA7P41226 1012 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 INHBEP58166 350 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 ARHGEF16Q5VV41 709 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 GPRC5AQ8NFJ5 357 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 LRWD1Q9UFC0 647 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 DOCK5Q9H7D0 1870 aa21.97■■□□□ 1.11
PDLIM2-205ENST00000397761 SLC26A4O43511 780 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 CDC25AP30304 524 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 MDM2Q00987 491 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 KANK3Q6NY19 840 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 ANKRD35Q8N283 1001 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 PDILTQ8N807 584 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 FAM133AQ8N9E0 248 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 IQUBQ8NA54 791 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 R3HDMLQ9H3Y0 253 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 DISC1Q9NRI5 854 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 VAV3Q9UKW4 847 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 DOCK3Q8IZD9 2030 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 ASTN1O14525 1302 aa21.96■■□□□ 1.11
PDLIM2-205ENST00000397761 POTEMA6NI47 508 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms