RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 VSIG10LQ86VR7 867 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 RAET1EQ8TD07 263 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 ZFP91Q96JP5 570 aaPredicted RBP26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 TINF2Q9BSI4 451 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 FLRT1Q9NZU1 646 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 MYSM1Q5VVJ2 828 aa26.86■■□□□ 1.89
TSPAN4-203ENST00000397397 OLFML2BQ68BL8 750 aa26.86■■□□□ 1.89
TSPAN4-203ENST00000397397 MAMDC4Q6UXC1 1216 aa26.86■■□□□ 1.89
TSPAN4-203ENST00000397397 MSL3Q8N5Y2 521 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-203ENST00000397397 MORC4Q8TE76 937 aa26.86■■□□□ 1.89
TSPAN4-203ENST00000397397 LRRC37A2A6NM11 1700 aa26.86■■□□□ 1.89
TSPAN4-203ENST00000397397 EDIL3O43854 480 aa26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 MRPS9P82933 396 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 FAM173BQ6P4H8 233 aa26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 TRMT44Q8IYL2 757 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 RTEL1Q9NZ71 1219 aa26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 MYH15Q9Y2K3 1946 aa26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 SYNGAP1Q96PV0 1343 aa26.85■■□□□ 1.89
TSPAN4-203ENST00000397397 TRAPPC10P48553 1259 aa26.84■■□□□ 1.89
TSPAN4-203ENST00000397397 RILPL1Q5EBL4 403 aa26.84■■□□□ 1.89
TSPAN4-203ENST00000397397 ADCY3O60266 1144 aa26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 CCNT1O60563 726 aaKnown RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 EIF3JO75822 258 aaKnown RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 TOB1P50616 345 aaPredicted RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 FOXD4L6Q3SYB3 417 aaPredicted RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 TTC38Q5R3I4 469 aa26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 FOXD4L3Q6VB84 417 aaPredicted RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 NAP1L4Q99733 375 aaKnown RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.83■■□□□ 1.89
TSPAN4-203ENST00000397397 WNT7AO00755 349 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 STAM2O75886 525 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 TDP2O95551 362 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 SNAI1O95863 264 aaPredicted RBP26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 CIITAP33076 1130 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 EEPD1Q7L9B9 569 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 TRIB2Q92519 343 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 UBIAD1Q9Y5Z9 338 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 ELNP15502 786 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 CYP2C19P33261 490 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 NBR1Q14596 966 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 CEP55Q53EZ4 464 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 MXRA8Q9BRK3 442 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 PTCH2Q9Y6C5 1203 aa26.82■■□□□ 1.88
TSPAN4-203ENST00000397397 CYP3A7-CYP3A51PA0A087WV96 503 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 CCDC85CA6NKD9 419 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 FAM86B1E9PN63 330 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 FAM86B2P0C5J1 330 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 GCFC2P16383 781 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 CYP3A7P24462 503 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 ZNF174Q15697 407 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 PKN2Q16513 984 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 MFSD14CQ5VZR4 134 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 PPP4R3AQ6IN85 833 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 MOXD1Q6UVY6 613 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 NLRX1Q86UT6 975 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 FBXO16Q8IX29 292 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 CYP2W1Q8TAV3 490 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 PTPN22Q9Y2R2 807 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 PCDHB6Q9Y5E3 794 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 ATP6V1DQ9Y5K8 247 aa26.81■■□□□ 1.88
TSPAN4-203ENST00000397397 KIAA1217Q5T5P2 1943 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 IGHA2P01877 340 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 ITGB5P18084 799 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 MCM7P33993 719 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 PRR16Q569H4 304 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 SEPT14Q6ZU15 432 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 PLA2G4DQ86XP0 818 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 PXYLP1Q8TE99 480 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 ZNF396Q96N95 335 aaPredicted RBP26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 VTA1Q9NP79 307 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 JADE2Q9NQC1 790 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 DDX25Q9UHL0 483 aaKnown RBP26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 CNPY2Q9Y2B0 182 aa26.8■■□□□ 1.88
TSPAN4-203ENST00000397397 GNPTABQ3T906 1256 aa26.79■■□□□ 1.88
TSPAN4-203ENST00000397397 FBXO46Q6PJ61 603 aaPredicted RBP26.79■■□□□ 1.88
TSPAN4-203ENST00000397397 MBOAT7Q96N66 472 aa26.79■■□□□ 1.88
TSPAN4-203ENST00000397397 INPP4AQ96PE3 977 aaPredicted RBP26.79■■□□□ 1.88
TSPAN4-203ENST00000397397 WDR11Q9BZH6 1224 aa26.79■■□□□ 1.88
TSPAN4-203ENST00000397397 ABHD16BQ9H3Z7 469 aa26.79■■□□□ 1.88
TSPAN4-203ENST00000397397 IGLV3-22A0A075B6J6 115 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 MEIS1O00470 390 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 RGS20O76081 388 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 Q4G0T1 1027 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 NIPA1Q7RTP0 329 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 SLAIN1Q8ND83 568 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 GPRASP2Q96D09 838 aa26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 ZHX1Q9UKY1 873 aaPredicted RBP26.78■■□□□ 1.88
TSPAN4-203ENST00000397397 SLC37A4O43826 429 aa26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 HMGCRP04035 888 aa26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 MTMR1Q13613 665 aa26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 ACVR2BQ13705 512 aa26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 PRAMEF19Q5SWL8 479 aa26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 KATNBL1Q9H079 304 aa26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.77■■□□□ 1.88
TSPAN4-203ENST00000397397 NEMFO60524 1076 aa26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 ARP10275 920 aa26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 GRK4P32298 578 aa26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 SETQ01105 290 aaPredicted RBP26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 DNM1Q05193 864 aaKnown RBP26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 TRIM32Q13049 653 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms