RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KIFC2Q96AC6 838 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 PHF20Q9BVI0 1012 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 FBXO28Q9NVF7 368 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 EYSQ5T1H1 3165 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 MYO9BQ13459 2157 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 STXBP3O00186 592 aa15.15■□□□□ 0.02
SEC13-209ENST00000397117 NCLP19338 710 aaKnown RBP15.15■□□□□ 0.02
SEC13-209ENST00000397117 KRT2P35908 639 aa15.15■□□□□ 0.02
SEC13-209ENST00000397117 CDC37Q16543 378 aaPredicted RBP15.15■□□□□ 0.02
SEC13-209ENST00000397117 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
SEC13-209ENST00000397117 DIS3L2Q8IYB7 885 aaKnown RBP15.15■□□□□ 0.02
SEC13-209ENST00000397117 REPS2Q8NFH8 660 aa15.15■□□□□ 0.02
SEC13-209ENST00000397117 MTMR8Q96EF0 704 aa15.15■□□□□ 0.02
SEC13-209ENST00000397117 PRR12Q9ULL5 1215 aa15.15■□□□□ 0.02
SEC13-209ENST00000397117 VCANP13611 3396 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 A0A1W2PQ45 241 aaPredicted RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 A0A1W2PQY0 241 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 VWA5AO00534 786 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 ADAMTS4O75173 837 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 STAT3P40763 770 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 KCTD2Q14681 263 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 RNPC3Q96LT9 517 aaKnown RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 SLF1Q9BQI6 1058 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 TSEN34Q9BSV6 310 aaKnown RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 FOXP1Q9H334 677 aaPredicted RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 ZNF214Q9UL59 606 aaPredicted RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 SPTBN5Q9NRC6 3674 aaKnown RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 FOSL2P15408 326 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 RAG1P15918 1043 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.015e-11■■□□□ 11.9
SEC13-209ENST00000397117 DNM1Q05193 864 aaKnown RBP15.14■□□□□ 0.01
SEC13-209ENST00000397117 FAAP100Q0VG06 881 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 QRICH1Q2TAL8 776 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 GALNT17Q6IS24 598 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 ANKRD33Q7Z3H0 272 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 TOX2Q96NM4 488 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 C6orf50Q9HD87 102 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 PPP1R9AQ9ULJ8 1098 aa15.14■□□□□ 0.01
SEC13-209ENST00000397117 KIF28PB7ZC32 967 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 PQBP1O60828 265 aaKnown RBP15.13■□□□□ 0.01
SEC13-209ENST00000397117 AKR1A1P14550 325 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 GNA11P29992 359 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 MCM4P33991 863 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 KRT85P78386 507 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 FPGSQ05932 587 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 TRAF1Q13077 416 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 NOSTRINQ8IVI9 506 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 PRPF38AQ8NAV1 312 aaKnown RBP15.13■□□□□ 0.01
SEC13-209ENST00000397117 KLHDC9Q8NEP7 349 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 ZNF396Q96N95 335 aaPredicted RBP15.13■□□□□ 0.01
SEC13-209ENST00000397117 AMNQ9BXJ7 453 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 TMEM39AQ9NV64 488 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 PCDHA4Q9UN74 947 aa15.13■□□□□ 0.01
SEC13-209ENST00000397117 MCM3APO60318 1980 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.12■□□□□ 0.01
SEC13-209ENST00000397117 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.12■□□□□ 0.01
SEC13-209ENST00000397117 SMCO2A6NFE2 343 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 DDX11L8A8MPP1 907 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 COPB2P35606 906 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 ACLYP53396 1101 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 SNAP25P60880 206 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 GRIN2CQ14957 1233 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 CCSAPQ6IQ19 270 aaPredicted RBP15.12■□□□□ 0.01
SEC13-209ENST00000397117 TYW1BQ6NUM6 668 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 BLIDQ8IZY5 108 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 BICD2Q8TD16 824 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 LENG1Q96BZ8 264 aaPredicted RBP15.12■□□□□ 0.01
SEC13-209ENST00000397117 CHAMP1Q96JM3 812 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 PRDM6Q9NQX0 595 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 CFAP45Q9UL16 551 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 CTDP1Q9Y5B0 961 aaPredicted RBP15.12■□□□□ 0.01
SEC13-209ENST00000397117 PCDHA1Q9Y5I3 950 aa15.12■□□□□ 0.01
SEC13-209ENST00000397117 CDH23Q9H251 3354 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 PPP1R11O60927 126 aaPredicted RBP15.11■□□□□ 0.01
SEC13-209ENST00000397117 SNAI1O95863 264 aaPredicted RBP15.11■□□□□ 0.01
SEC13-209ENST00000397117 NR5A1Q13285 461 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 CSPP1Q1MSJ5 1256 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
SEC13-209ENST00000397117 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 ZMYND12Q9H0C1 365 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 RANBP17Q9H2T7 1088 aaKnown RBP15.11■□□□□ 0.01
SEC13-209ENST00000397117 CNPY2Q9Y2B0 182 aa15.11■□□□□ 0.01
SEC13-209ENST00000397117 DNAJC25-GNG10A0A024R161 153 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 ESYT2A0FGR8 921 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 DCDC2CA8MYV0 355 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 PTMSP20962 102 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 ADCY7P51828 1080 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 MYSM1Q5VVJ2 828 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 MAMDC4Q6UXC1 1216 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 SYMPKQ92797 1274 aaKnown RBP15.1■□□□□ 0.01
SEC13-209ENST00000397117 FAM184BQ9ULE4 1060 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms