RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 IKBKEQ14164 716 aa17.6■□□□□ 0.41
SEC13-206ENST00000397102 PUS10Q3MIT2 529 aaKnown RBP17.6■□□□□ 0.41
SEC13-206ENST00000397102 PTCRAQ6ISU1 281 aaPredicted RBP17.6■□□□□ 0.41
SEC13-206ENST00000397102 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
SEC13-206ENST00000397102 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
SEC13-206ENST00000397102 TCP11L1Q9NUJ3 509 aa17.6■□□□□ 0.41
SEC13-206ENST00000397102 MICAL3Q7RTP6 2002 aa17.6■□□□□ 0.41
SEC13-206ENST00000397102 GRXCR2A6NFK2 248 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 PTK7Q13308 1070 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 MAF1Q9H063 256 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 HDAC6Q9UBN7 1215 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 INSL6Q9Y581 213 aa17.59■□□□□ 0.41
SEC13-206ENST00000397102 ZNF543Q08ER8 600 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 DGKDQ16760 1214 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 FAM117BQ6P1L5 589 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 NEK9Q8TD19 979 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 UIMC1Q96RL1 719 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 KATNAL1Q9BW62 490 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 TOMM22Q9NS69 142 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
SEC13-206ENST00000397102 SNHG28P0DPA3 235 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 PSEN2P49810 448 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 MRE11P49959 708 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 TRIM71Q2Q1W2 868 aaKnown RBP17.57■□□□□ 0.4
SEC13-206ENST00000397102 VPS53Q5VIR6 699 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 TRAF7Q6Q0C0 670 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 SEPT14Q6ZU15 432 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 CHST3Q7LGC8 479 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 MRPL38Q96DV4 380 aaKnown RBP17.57■□□□□ 0.4
SEC13-206ENST00000397102 C17orf80Q9BSJ5 609 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 KCNH6Q9H252 994 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 MYH7BA7E2Y1 1941 aa17.57■□□□□ 0.4
SEC13-206ENST00000397102 DCXO43602 365 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 LGR5O75473 907 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 HTRA4P83105 476 aaPredicted RBP17.56■□□□□ 0.4
SEC13-206ENST00000397102 MBTPS1Q14703 1052 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 MFSD10Q14728 455 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 ALX1Q15699 326 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 PTPROQ16827 1216 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 USH1GQ495M9 461 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 TIGD5Q53EQ6 642 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 RRP12Q5JTH9 1297 aaKnown RBP17.56■□□□□ 0.4
SEC13-206ENST00000397102 ZNF618Q5T7W0 954 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
SEC13-206ENST00000397102 NSUN6Q8TEA1 469 aaKnown RBP17.56■□□□□ 0.4
SEC13-206ENST00000397102 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
SEC13-206ENST00000397102 TTC14Q96N46 770 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 SAMD11Q96NU1 681 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 NLRC5Q86WI3 1866 aa17.56■□□□□ 0.4
SEC13-206ENST00000397102 EMSYQ7Z589 1322 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 HAS3O00219 553 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 F2P00734 622 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 AMHP03971 560 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 NHLH1Q02575 133 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
SEC13-206ENST00000397102 STXBP2Q15833 593 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
SEC13-206ENST00000397102 C20orf194Q5TEA3 1177 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.55■□□□□ 0.42e-23■■■■■ 54.1
SEC13-206ENST00000397102 WNT8BQ93098 351 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 TAAR1Q96RJ0 339 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 IWS1Q96ST2 819 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 COL4A6Q14031 1691 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 MYH6P13533 1939 aa17.55■□□□□ 0.4
SEC13-206ENST00000397102 RALGAPA2Q2PPJ7 1873 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 ABCB11O95342 1321 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 POTEB3A0JP26 581 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 H3BQ06 376 aaPredicted RBP17.54■□□□□ 0.4
SEC13-206ENST00000397102 KIAA0753Q2KHM9 967 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 POTEBQ6S5H4 581 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 MYOCDQ8IZQ8 938 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 PPTC7Q8NI37 304 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 SYTL5Q8TDW5 730 aaPredicted RBP17.54■□□□□ 0.4
SEC13-206ENST00000397102 PRKAG3Q9UGI9 489 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 DDX41Q9UJV9 622 aaKnown RBP17.54■□□□□ 0.4
SEC13-206ENST00000397102 FAM50BQ9Y247 325 aa17.54■□□□□ 0.4
SEC13-206ENST00000397102 ZNF286BP0CG31 522 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 LAMC2Q13753 1193 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 EPC2Q52LR7 807 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 BANK1Q8NDB2 785 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 DBF4BQ8NFT6 615 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
SEC13-206ENST00000397102 TBC1D5Q92609 795 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 PABPC5Q96DU9 382 aaKnown RBP17.53■□□□□ 0.4
SEC13-206ENST00000397102 FBXL18Q96ME1 805 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 COL20A1Q9P218 1284 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 RCAN3Q9UKA8 241 aa17.53■□□□□ 0.4
SEC13-206ENST00000397102 H3BNC9 293 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 FGAP02671 866 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 MX1P20591 662 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.4
SEC13-206ENST00000397102 ZP2Q05996 745 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 COL19A1Q14993 1142 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
SEC13-206ENST00000397102 MCF2L2Q86YR7 1114 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms