RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 TMTC3Q6ZXV5 915 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 MICU3Q86XE3 530 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
SEC13-204ENST00000397099 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
SEC13-204ENST00000397099 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
SEC13-204ENST00000397099 RNPC3Q96LT9 517 aaKnown RBP16.08■□□□□ 0.16
SEC13-204ENST00000397099 FAM161BQ96MY7 647 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 MYL10Q9BUA6 226 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 MTMR10Q9NXD2 777 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 PTGS1P23219 599 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 PTPN11Q06124 597 aaPredicted RBP16.07■□□□□ 0.16
SEC13-204ENST00000397099 PGM5Q15124 567 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 ZNF697Q5TEC3 545 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 SLC17A8Q8NDX2 589 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 GLT8D2Q9H1C3 349 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 TBX21Q9UL17 535 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
SEC13-204ENST00000397099 SCN10AQ9Y5Y9 1956 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 CD4P01730 458 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 HOXA13P31271 388 aaPredicted RBP16.06■□□□□ 0.16
SEC13-204ENST00000397099 DGKDQ16760 1214 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 RTN1Q16799 776 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 MFSD5Q6N075 450 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 NFRKBQ6P4R8 1299 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 PSTPIP2Q9H939 334 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 DDX41Q9UJV9 622 aaKnown RBP16.06■□□□□ 0.16
SEC13-204ENST00000397099 STXBP5LQ9Y2K9 1186 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
SEC13-204ENST00000397099 MYL3P08590 195 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
SEC13-204ENST00000397099 EPHB4P54760 987 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 PPIGQ13427 754 aaKnown RBP eCLIP16.05■□□□□ 0.16
SEC13-204ENST00000397099 FAM109BQ6ICB4 259 aaPredicted RBP16.05■□□□□ 0.16
SEC13-204ENST00000397099 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
SEC13-204ENST00000397099 TMEM199Q8N511 208 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 PPTC7Q8NI37 304 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 JAKMIP1Q96N16 626 aaKnown RBP16.05■□□□□ 0.16
SEC13-204ENST00000397099 KATNAL1Q9BW62 490 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 EHMT1Q9H9B1 1298 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 SNX14Q9Y5W7 946 aa16.05■□□□□ 0.16
SEC13-204ENST00000397099 COL6A3P12111 3177 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 KLF18A0A0U1RQI7 1052 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 GOLGA8AA7E2F4 631 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 GOLGA8BA8MQT2 603 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 ARIH2O95376 493 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
SEC13-204ENST00000397099 RXRAP19793 462 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 LY6KQ17RY6 165 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 PPP1R12CQ9BZL4 782 aa16.04■□□□□ 0.16
SEC13-204ENST00000397099 GRIN2DO15399 1336 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 MMP3P08254 477 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 ICAM3P32942 547 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEC13-204ENST00000397099 PSMC6P62333 389 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 SMAD3P84022 425 aaKnown RBP16.03■□□□□ 0.16
SEC13-204ENST00000397099 NEDD9Q14511 834 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 PCNX4Q63HM2 1172 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 MCTP2Q6DN12 878 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 GIMAP8Q8ND71 665 aaPredicted RBP16.03■□□□□ 0.16
SEC13-204ENST00000397099 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 AGXT2Q9BYV1 514 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 TM6SF1Q9BZW5 370 aa16.03■□□□□ 0.16
SEC13-204ENST00000397099 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
SEC13-204ENST00000397099 NID2Q14112 1375 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 MEIS2O14770 477 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 MAFGO15525 162 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 FIBPO43427 364 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 FOSP01100 380 aaPredicted RBP16.02■□□□□ 0.16
SEC13-204ENST00000397099 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.16
SEC13-204ENST00000397099 Q6ZUG5 572 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 HEATR3Q7Z4Q2 680 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 NLRX1Q86UT6 975 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 SESTD1Q86VW0 696 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 CCDC12Q8WUD4 166 aaPredicted RBP16.02■□□□□ 0.16
SEC13-204ENST00000397099 AFG1LQ8WV93 481 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 COPS5Q92905 334 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
SEC13-204ENST00000397099 HIPK3Q9H422 1215 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 BRPF3Q9ULD4 1205 aa16.02■□□□□ 0.16
SEC13-204ENST00000397099 CNTNAP5Q8WYK1 1306 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 HOXD8P13378 290 aaPredicted RBP16.01■□□□□ 0.15
SEC13-204ENST00000397099 CSF2RAP15509 400 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 CYP2C18P33260 490 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms