RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 KCNQ5Q9NR82 932 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 ERVK-24P63145 666 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 STRIP1Q5VSL9 837 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 APOBEC3HQ6NTF7 200 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 MYO1AQ9UBC5 1043 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 ZBTB22O15209 634 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 PBX1P40424 430 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 ZBED6P86452 979 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 CCDC181Q5TID7 509 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 APTXQ7Z2E3 356 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 GBP3Q9H0R5 595 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 SLURP2P0DP57 97 aa12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 RRAGAQ7L523 313 aa12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 DNM3Q9UQ16 869 aa12.83□□□□□ -0.35
PDXDC1-202ENST00000396410 F5H6K3 240 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 SEC31AO94979 1220 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 KLRC3Q07444 240 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 TRAF1Q13077 416 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 PSMD2Q13200 908 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 MAN2A1Q16706 1144 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 HSP90B2PQ58FF3 399 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 IQCEQ6IPM2 695 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 CCDC43Q96MW1 224 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 MYO6Q9UM54 1294 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 MAST2Q6P0Q8 1798 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 E9PMD0 336 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 GH2P01242 217 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 BMP3P12645 472 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 CHRNA5P30532 468 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 TUBB4BP68371 445 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 GABPAQ06546 454 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 IQCDQ96DY2 449 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 ACBD3Q9H3P7 528 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 NHEJ1Q9H9Q4 299 aaPredicted RBP12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 CFBP00751 764 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 TNNT3P45378 269 aaPredicted RBP12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 ZDHHC15Q96MV8 337 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
PDXDC1-202ENST00000396410 ENC1O14682 589 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 TACC1O75410 805 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 ARID5AQ03989 594 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 TSGA10Q9BZW7 698 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 CLRN2A0PK11 232 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 CCDC174Q6PII3 467 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 GUF1Q8N442 669 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 AGPAT5Q9NUQ2 364 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 LAMB1P07942 1786 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 DDTLA6NHG4 134 aaPredicted RBP12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 KLK7P49862 253 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 CKAP4Q07065 602 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 MCTP2Q6DN12 878 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 SECISBP2LQ93073 1101 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 PARD6BQ9BYG5 372 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 NLRC4Q9NPP4 1024 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 STK32BQ9NY57 414 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 NYAP2Q9P242 653 aa12.82□□□□□ -0.36
PDXDC1-202ENST00000396410 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 POTECB2RU33 542 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 CHMP2AO43633 222 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 COASYQ13057 564 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 DLGAP5Q15398 846 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 NAV1Q8NEY1 1877 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 FOSP01100 380 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 HOXA13P31271 388 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 FKBP3Q00688 224 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 IFIH1Q9BYX4 1025 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 EHD4Q9H223 541 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms