RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SAPCD2Q86UD0 394 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 SLC17A8Q8NDX2 589 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 NKX2-3Q8TAU0 364 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 OSBP2Q969R2 916 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ARL8AQ96BM9 186 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 KLRG1Q96E93 195 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 EEF2KMTQ96G04 330 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ABCF3Q9NUQ8 709 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 LMCD1Q9NZU5 365 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 MTMR7Q9Y216 660 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 AKAP11Q9UKA4 1901 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 SMAPO00193 183 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 RTN3O95197 1032 aaPredicted RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 PNOCQ13519 176 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 NAA16Q6N069 864 aaPredicted RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 CCDC25Q86WR0 208 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 GBP7Q8N8V2 638 aaPredicted RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 DPF2Q92785 391 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 CLMNQ96JQ2 1002 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 VCPKMTQ9H867 229 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 CWC25Q9NXE8 425 aaPredicted RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 ABCA3Q99758 1704 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 VWA3AA6NCI4 1184 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 PPP1R37O75864 691 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 ATP2A2P16615 1042 aaKnown RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 ADORA1P30542 326 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 MTA1Q13330 715 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
NDE1-202ENST00000396355 PI16Q6UXB8 463 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 CCDC80Q76M96 950 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 AMIGO3Q86WK7 504 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 MFN1Q8IWA4 741 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 PRPF31Q8WWY3 499 aaKnown RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 TRIM7Q9C029 511 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 HPCAL4Q9UM19 191 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 CDHR2Q9BYE9 1310 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 FLOT1O75955 427 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 CPP00450 1065 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 ZCCHC18P0CG32 403 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 ROR2Q01974 943 aaKnown RBP9.23□□□□□ -0.93
NDE1-202ENST00000396355 ZBTB16Q05516 673 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 FSTL1Q12841 308 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 AMOTL1Q8IY63 956 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 USP6NLQ92738 828 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 GORASP1Q9BQQ3 440 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
NDE1-202ENST00000396355 TMOD4Q9NZQ9 345 aa9.23□□□□□ -0.93
NDE1-202ENST00000396355 CCDC85CA6NKD9 419 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 DNAJC8O75937 253 aaPredicted RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 FDPSP14324 419 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 ATP4AP20648 1035 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 TMED10P49755 219 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 PDE6CP51160 858 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 PAK2Q13177 524 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 RCN2Q14257 317 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 C17orf50Q8WW18 174 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 FAM81BQ96LP2 452 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 RNPC3Q96LT9 517 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 NAP1L3Q99457 506 aaPredicted RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 DSCC1Q9BVC3 393 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 HOMER3Q9NSC5 361 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 TTF2Q9UNY4 1162 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 ZNF652Q9Y2D9 606 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 TNS1Q9HBL0 1735 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 EYA2O00167 538 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 STX10O60499 249 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 UBTFL6P0CB48 400 aaPredicted RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 SERPINB3P29508 390 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 RFC5P40937 340 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 NDUFA8P51970 172 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 KLC1Q07866 573 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 RFX8Q6ZV50 586 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 ELOA2Q8IYF1 753 aaPredicted RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 OPTNQ96CV9 577 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 SLC39A2Q9NP94 309 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 UTP6Q9NYH9 597 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 C4BP0C0L5 1744 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 GMNCA6NCL1 334 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 PDIA3P30101 505 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 ARID5AQ03989 594 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 IQCB1Q15051 598 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 ZNF449Q6P9G9 518 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 SYNE4Q8N205 404 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 DRAXINQ8NBI3 349 aaPredicted RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 CNKSR1Q969H4 720 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 NACA2Q9H009 215 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 EPB41L5Q9HCM4 733 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 GJB4Q9NTQ9 266 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 DNAAF2Q9NVR5 837 aaKnown RBP9.22□□□□□ -0.93
NDE1-202ENST00000396355 DENND2AQ9ULE3 1009 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 NFU1Q9UMS0 254 aa9.22□□□□□ -0.93
NDE1-202ENST00000396355 WDR91A4D1P6 747 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms