RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 DDX25Q9UHL0 483 aaKnown RBP10.63□□□□□ -0.71
CDRT1-204ENST00000395906 TMED5Q9Y3A6 229 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 LRRC37A3O60309 1634 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 LRP6O75581 1613 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 ANO9A1A5B4 782 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 F8W031 263 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-204ENST00000395906 ERVK-24P63145 666 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 PDE4BQ07343 736 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 EZH2Q15910 746 aaKnown RBP10.63□□□□□ -0.71
CDRT1-204ENST00000395906 MAEAQ7L5Y9 396 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 CARD9Q9H257 536 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 SPATA31A5Q5VU36 1347 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 SPATA31A7Q8IWB4 1347 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 CASP14P31944 242 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 PBX1P40424 430 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 SYKP43405 635 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 FOSBP53539 338 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 PNOCQ13519 176 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 PDIA6Q15084 440 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 CWF19L2Q2TBE0 894 aaKnown RBP10.62□□□□□ -0.71
CDRT1-204ENST00000395906 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 ATP8A2Q9NTI2 1148 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 DAAM1Q9Y4D1 1078 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 BCL9LQ86UU0 1499 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 FUT4P22083 530 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 TRPC1P48995 793 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 PLOD1Q02809 727 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-204ENST00000395906 LMNB2Q03252 620 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 SULT2A1Q06520 285 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 LRIG3Q6UXM1 1119 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 COPS6Q7L5N1 327 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 ZNF554Q86TJ5 538 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 SNRNP27Q8WVK2 155 aaKnown RBP10.62□□□□□ -0.71
CDRT1-204ENST00000395906 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 CHMP6Q96FZ7 201 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 RMND1Q9NWS8 449 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 BABAM1Q9NWV8 329 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 DBF4Q9UBU7 674 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-204ENST00000395906 CLIC4Q9Y696 253 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 AFF2P51816 1311 aa10.62□□□□□ -0.71
CDRT1-204ENST00000395906 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 ZNF185O15231 689 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 ASAP2O43150 1006 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 SNRPA1P09661 255 aaKnown RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 XBP1P17861 261 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 CA8P35219 290 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 HOXD12P35452 270 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 MLH1P40692 756 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 MSH2P43246 934 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 ZNF131P52739 623 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 NCALDP61601 193 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 BIRC3Q13489 604 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 TRPM8Q7Z2W7 1104 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 CTNNBL1Q8WYA6 563 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 GBP5Q96PP8 586 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 TIPINQ9BVW5 301 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 TUBA8Q9NY65 449 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 HMG20BQ9P0W2 317 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 TRIM10Q9UDY6 481 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 MAP3K2Q9Y2U5 619 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 COL14A1Q05707 1796 aaKnown RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 ERVV-2B6SEH9 535 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 GCOM1H8Y6P7 765 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 TEX33O43247 280 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 SUPT3HO75486 399 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 GLRX3O76003 335 aaKnown RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 MYZAPP0CAP1 466 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 TMOD1P28289 359 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 PEX5P50542 639 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 PPP2R2AP63151 447 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 MCL1Q07820 350 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 RC3H1Q5TC82 1133 aaKnown RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 IFT20Q8IY31 132 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 LRRC43Q8N309 656 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 FNBP4Q8N3X1 1017 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
CDRT1-204ENST00000395906 XAGE3Q8WTP9 111 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 IFT74Q96LB3 600 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 CTTNBP2NLQ9P2B4 639 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 SCN11AQ9UI33 1791 aa10.61□□□□□ -0.71
CDRT1-204ENST00000395906 ITIH6Q6UXX5 1313 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 USP42Q9H9J4 1324 aaKnown RBP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 TMEM247A6NEH6 219 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 A8MUI8 341 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 HNRNPRO43390 633 aaKnown RBP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 TROVE2P10155 538 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 CDC27P30260 824 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 LSAMPQ13449 338 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms