RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TPRP12270 2363 aaKnown RBP16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 MYH7P12883 1935 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 RAD50Q92878 1312 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 C5orf67F2Z3F1 127 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 ARIH2O95376 493 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 CLUL1Q15846 466 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 EP400NLQ6ZTU2 488 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 CLUAP1Q96AJ1 413 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
VCPKMT-201ENST00000395859 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 ANP32CO43423 234 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 NBL1P41271 181 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 NUBP1P53384 320 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 SNAP25P60880 206 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 ZNF618Q5T7W0 954 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 CCDC62Q6P9F0 684 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 TOP1MTQ969P6 601 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 CFAP47Q6ZTR5 3102 aa16.3■□□□□ 0.2
VCPKMT-201ENST00000395859 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 AMHP03971 560 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 PTK7Q13308 1070 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 ADAM15Q13444 863 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 GIMAP6Q6P9H5 292 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 MYOCDQ8IZQ8 938 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 STRBPQ96SI9 672 aaKnown RBP16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 LMAN2LQ9H0V9 348 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 EP300Q09472 2414 aaPredicted RBP16.29■□□□□ 0.2
VCPKMT-201ENST00000395859 H0Y858 1186 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 NFIBO00712 420 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 LINC01565O15544 149 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 ICAM1P05362 532 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 MMP3P08254 477 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 GTF2F1P35269 517 aaKnown RBP eCLIP16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 TRPC6Q9Y210 931 aa16.28■□□□□ 0.2
VCPKMT-201ENST00000395859 HAS3O00219 553 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 GRM6O15303 877 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 RGS20O76081 388 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 ID4P47928 161 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 CAMK1Q14012 370 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 HIC1Q14526 733 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 AFG1LQ8WV93 481 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 CLEC4DQ8WXI8 215 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
VCPKMT-201ENST00000395859 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 GALR2O43603 387 aaPredicted RBP16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 PRDM1O75626 825 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 RB1P06400 928 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 TXNP10599 105 aaKnown RBP16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 MCCP23508 829 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 SLC1A4P43007 532 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 KCTD1Q719H9 257 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 RASGRP2Q7LDG7 609 aa16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 RC3H2Q9HBD1 1191 aaKnown RBP16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 EPB41L4AQ9HCS5 686 aaPredicted RBP16.26■□□□□ 0.19
VCPKMT-201ENST00000395859 ACACBO00763 2458 aa16.25■□□□□ 0.19
VCPKMT-201ENST00000395859 COASYQ13057 564 aa16.25■□□□□ 0.19
VCPKMT-201ENST00000395859 YME1L1Q96TA2 773 aa16.25■□□□□ 0.19
VCPKMT-201ENST00000395859 HAUS7Q99871 368 aa16.25■□□□□ 0.19
VCPKMT-201ENST00000395859 OSBPL7Q9BZF2 842 aa16.25■□□□□ 0.19
VCPKMT-201ENST00000395859 CHD6Q8TD26 2715 aa16.25■□□□□ 0.19
VCPKMT-201ENST00000395859 CACNA1GO43497 2377 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 MINDY4BA8MYZ0 360 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 F2P00734 622 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 ATP5JP18859 108 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 ZNF444Q8N0Y2 327 aaPredicted RBP16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 BOLA2Q9H3K6 86 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 CEP250Q9BV73 2442 aa16.24■□□□□ 0.19
VCPKMT-201ENST00000395859 MED19A0JLT2 244 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms