RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IVNS1ABPQ9Y6Y0 642 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 MAFGO15525 162 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 CCND2P30279 289 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 MAPK4P31152 587 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 PDIA5Q14554 519 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 Q3C1V9 767 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 TPRNQ4KMQ1 711 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 WDR78Q5VTH9 848 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 RESP18Q5W5W9 173 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 ABRAQ8N0Z2 381 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 MTMR9Q96QG7 549 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 TAAR1Q96RJ0 339 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 MMP19Q99542 508 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 MYH7BA7E2Y1 1941 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 IGF2BP3O00425 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
VAPB-202ENST00000395802 KINO60870 393 aaKnown RBP15.47■□□□□ 0.07
VAPB-202ENST00000395802 LETM1O95202 739 aaPredicted RBP15.47■□□□□ 0.07
VAPB-202ENST00000395802 BCRP11274 1271 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.07
VAPB-202ENST00000395802 PGM5Q15124 567 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 ZSCAN23Q3MJ62 389 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 CDHR1Q96JP9 859 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 PDCD2LQ9BRP1 358 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 CSRNP2Q9H175 543 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 PCDHA12Q9UN75 941 aa15.47■□□□□ 0.07
VAPB-202ENST00000395802 FAM237AA0A1B0GTK4 181 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 SLC37A4O43826 429 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 TLR2O60603 784 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 EIF2AK2P19525 551 aaKnown RBP15.46■□□□□ 0.07
VAPB-202ENST00000395802 CYP4F22Q6NT55 531 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 NLRX1Q86UT6 975 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 CLIC6Q96NY7 704 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 MXRA8Q9BRK3 442 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 TMEM60Q9H2L4 133 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 KCNMB3Q9NPA1 279 aa15.46■□□□□ 0.07
VAPB-202ENST00000395802 FAM86B1E9PN63 330 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 MEIS1O00470 390 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 FAM86B2P0C5J1 330 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 UBA7P41226 1012 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 TXKP42681 527 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 SYKP43405 635 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 GRM1Q13255 1194 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 GNPTABQ3T906 1256 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 SHC4Q6S5L8 630 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 VSIG10LQ86VR7 867 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 CAPNS2Q96L46 248 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
VAPB-202ENST00000395802 SLC5A4Q9NY91 659 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 HOOK1Q9UJC3 728 aaKnown RBP15.45■□□□□ 0.06
VAPB-202ENST00000395802 KCNH3Q9ULD8 1083 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 A0A1B0GVL5 298 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 EDIL3O43854 480 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 NR3C2P08235 984 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 PFKFB1P16118 471 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 STXBP2Q15833 593 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 CCDC183Q5T5S1 534 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 TIGD1Q96MW7 591 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 DACT1Q9NYF0 836 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 CCDC39Q9UFE4 941 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
VAPB-202ENST00000395802 IGLV3-22A0A075B6J6 115 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 FSD2A1L4K1 749 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 CTAGE5O15320 804 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 SLC26A4O43511 780 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 CA12O43570 354 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 MYCLP12524 364 aaPredicted RBP15.44■□□□□ 0.06
VAPB-202ENST00000395802 DEKP35659 375 aaKnown RBP15.44■□□□□ 0.06
VAPB-202ENST00000395802 TECP42680 631 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 NDUFA8P51970 172 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 ZNF445P59923 1031 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 UBXN2AP68543 259 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 MTMR1Q13613 665 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 IGSF22Q8N9C0 903 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 FAM133AQ8N9E0 248 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 JADE2Q9NQC1 790 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 LRWD1Q9UFC0 647 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 HPSEQ9Y251 543 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 MRVI1Q9Y6F6 885 aa15.44■□□□□ 0.06
VAPB-202ENST00000395802 NR1I2O75469 434 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 EIF3JO75822 258 aaKnown RBP15.43■□□□□ 0.06
VAPB-202ENST00000395802 MAP2K2P36507 400 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 KANK3Q6NY19 840 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 FMR1NBQ8N0W7 255 aaPredicted RBP15.43■□□□□ 0.06
VAPB-202ENST00000395802 ERMNQ8TAM6 284 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 ETNPPLQ8TBG4 499 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 SYMPKQ92797 1274 aaKnown RBP15.43■□□□□ 0.06
VAPB-202ENST00000395802 HAS1Q92839 578 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 LENG9Q96B70 501 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 GPRASP2Q96D09 838 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 ZNF577Q9BSK1 485 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 WDR11Q9BZH6 1224 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 NUP62CLQ9H1M0 184 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 EFCC1Q9HA90 598 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 TCEAL9Q9UHQ7 104 aa15.43■□□□□ 0.06
VAPB-202ENST00000395802 UBIAD1Q9Y5Z9 338 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms