RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 RTN1Q16799 776 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 TDHQ8IZJ6 230 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 BADQ92934 168 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 CUL5Q93034 780 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 PSTPIP2Q9H939 334 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 PCDH10Q9P2E7 1040 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 GRIN2DO15399 1336 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 MEIS2O14770 477 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 CD4P01730 458 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 MYL3P08590 195 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 TGFB3P10600 412 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 RAG1P15918 1043 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 CCND2P30279 289 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 PURAQ00577 322 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 FUT2Q10981 343 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 FAM126BQ8IXS8 530 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 MTG1Q9BT17 334 aaPredicted RBP16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 AGXT2Q9BYV1 514 aa16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 FAM217BQ9NTX9 383 aaPredicted RBP16.12■□□□□ 0.17
HLA-DMA-203ENST00000395305 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 STAM2O75886 525 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 RGS20O76081 388 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 TIMP1P01033 207 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 CASTP20810 708 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 ITGB8P26012 769 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 PSMC6P62333 389 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 ARHGAP1Q07960 439 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 LRIT3Q3SXY7 679 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 USP17L6PQ6QN14 398 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 IL31RAQ8NI17 732 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 BRF1Q92994 677 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 EMID1Q96A84 441 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 ZSWIM6Q9HCJ5 1215 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 TBX21Q9UL17 535 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 V9GY48 417 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 FRMPD4Q14CM0 1322 aa16.11■□□□□ 0.17
HLA-DMA-203ENST00000395305 CDC27P30260 824 aa16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 XRRA1Q6P2D8 792 aa16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 RUFY3Q7L099 469 aa16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 AFG1LQ8WV93 481 aa16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
HLA-DMA-203ENST00000395305 LAMA2P24043 3122 aaKnown RBP16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 EVCP57679 992 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 NBPF20Q3BBV1 942 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 HEATR3Q7Z4Q2 680 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 LTBP2Q14767 1821 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 CNTNAP5Q8WYK1 1306 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
HLA-DMA-203ENST00000395305 SUPT20HL2P0C7V6 817 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 ICAM3P32942 547 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 PTPN11Q06124 597 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 DGKDQ16760 1214 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 GNPTABQ3T906 1256 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 CELF3Q5SZQ8 465 aaKnown RBP16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 PCNX4Q63HM2 1172 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 MFSD5Q6N075 450 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 TRPV6Q9H1D0 765 aa16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-203ENST00000395305 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 SOX1O00570 391 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 EIF5BO60841 1220 aaKnown RBP16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 PPFIA4O75335 1185 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 MMP3P08254 477 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 SP2Q02086 613 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 FPGSQ05932 587 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 SHHQ15465 462 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 WWC2Q6AWC2 1192 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 RTEL1Q9NZ71 1219 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 SCN10AQ9Y5Y9 1956 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 LAMA3Q16787 3333 aa16.07■□□□□ 0.16
HLA-DMA-203ENST00000395305 NID2Q14112 1375 aa16.06■□□□□ 0.16
HLA-DMA-203ENST00000395305 B4GALT4O60513 344 aa16.06■□□□□ 0.16
HLA-DMA-203ENST00000395305 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
HLA-DMA-203ENST00000395305 NAPAP54920 295 aa16.06■□□□□ 0.16
HLA-DMA-203ENST00000395305 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
HLA-DMA-203ENST00000395305 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms