RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 PTGS1P23219 599 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 ATN1P54259 1190 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 PPP1R18Q6NYC8 613 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 NOL8Q76FK4 1167 aaKnown RBP15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 Q7L0L9 218 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 FCHSD1Q86WN1 690 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 SLC17A8Q8NDX2 589 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 IL31RAQ8NI17 732 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 CUL5Q93034 780 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 FERMT2Q96AC1 680 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 PSTPIP2Q9H939 334 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 V9GY48 417 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 WDR81Q562E7 1941 aa15.38■□□□□ 0.05
HLA-DMA-202ENST00000395303 STXBP3O00186 592 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 PRPF3O43395 683 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 STAM2O75886 525 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 RGS20O76081 388 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 IFNAR1P17181 557 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 CCND2P30279 289 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 BEX3Q00994 111 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 PFKFB3Q16875 520 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 USP17L6PQ6QN14 398 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 HEATR3Q7Z4Q2 680 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 SMARCC2Q8TAQ2 1214 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 UBE2OQ9C0C9 1292 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 STARD7Q9NQZ5 370 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 PDRG1Q9NUG6 133 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 BARHL2Q9NY43 387 aa15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 NAP1L2Q9ULW6 460 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-202ENST00000395303 ZEB2O60315 1214 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 CABYRO75952 493 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 TXNP10599 105 aaKnown RBP15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 CDK7P50613 346 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 MRPS9P82933 396 aaKnown RBP15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 PKN1Q16512 942 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 SEPT14Q6ZU15 432 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 ANKRD33Q7Z3H0 272 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 DEFB123Q8N688 67 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 COPS5Q92905 334 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 GLT1D1Q96MS3 346 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
HLA-DMA-202ENST00000395303 A6NJR5 290 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 GH1P01241 217 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 SCG2P13521 617 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 ICAM3P32942 547 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 CPT1AP50416 773 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 ARHGAP1Q07960 439 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 TRIM60Q495X7 471 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 PCNX4Q63HM2 1172 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 XRRA1Q6P2D8 792 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 SLC43A3Q8NBI5 491 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 OR6J1Q8NGC5 347 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 EMID1Q96A84 441 aaPredicted RBP15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 GLT8D2Q9H1C3 349 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 POLR3EQ9NVU0 708 aa15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 DDX41Q9UJV9 622 aaKnown RBP15.35■□□□□ 0.05
HLA-DMA-202ENST00000395303 A0A0U1RQG5 324 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 ESYT2A0FGR8 921 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 ARVCFO00192 962 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 DLL1O00548 723 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 TGFB3P10600 412 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 MYCLP12524 364 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 NAPAP54920 295 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 CCT2P78371 535 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 MDM2Q00987 491 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 TLE2Q04725 743 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 INPP4AQ96PE3 977 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 NCOA5Q9HCD5 579 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 ATP11BQ9Y2G3 1177 aa15.34■□□□□ 0.05
HLA-DMA-202ENST00000395303 KPNA6O60684 536 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 FOSP01100 380 aaPredicted RBP15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 HOXD8P13378 290 aaPredicted RBP15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 PURAQ00577 322 aaKnown RBP15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 UBE2SQ16763 222 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 CXCL17Q6UXB2 119 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 ZMYND12Q9H0C1 365 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 PDLIM7Q9NR12 457 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 PCDHA6Q9UN73 950 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 STXBP5LQ9Y2K9 1186 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 PCDHA8Q9Y5H6 950 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 MRVI1Q9Y6F6 885 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 MROH7Q68CQ1 1323 aa15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 MYH9P35579 1960 aaKnown RBP15.33■□□□□ 0.04
HLA-DMA-202ENST00000395303 UNC80Q8N2C7 3258 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 ADCY7P51828 1080 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 SEMA3FQ13275 785 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms