RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 BRAPQ7Z569 592 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 AMNQ9BXJ7 453 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 SPC25Q9HBM1 224 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 FLRT1Q9NZU1 646 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 OGDHLQ9ULD0 1010 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 PCDHA4Q9UN74 947 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 KCNJ14Q9UNX9 436 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 MRPL11Q9Y3B7 192 aaKnown RBP9.7□□□□□ -0.86
HERC4-203ENST00000395185 MORC2Q9Y6X9 1032 aaPredicted RBP9.7□□□□□ -0.86
HERC4-203ENST00000395185 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 MYH8P13535 1937 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 DNAJC25-GNG10A0A024R161 153 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 VPS37CA5D8V6 355 aaPredicted RBP9.69□□□□□ -0.86
HERC4-203ENST00000395185 EDIL3O43854 480 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 RARBP10826 455 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 CLK2P49760 499 aaKnown RBP9.69□□□□□ -0.86
HERC4-203ENST00000395185 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
HERC4-203ENST00000395185 PRAMEF19Q5SWL8 479 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 MAMDC4Q6UXC1 1216 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 RNF207Q6ZRF8 634 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 FBXO11Q86XK2 927 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 NOSTRINQ8IVI9 506 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 DIS3L2Q8IYB7 885 aaKnown RBP9.69□□□□□ -0.86
HERC4-203ENST00000395185 BLIDQ8IZY5 108 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 CCDC148Q8NFR7 591 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
HERC4-203ENST00000395185 PAWRQ96IZ0 340 aaKnown RBP9.69□□□□□ -0.86
HERC4-203ENST00000395185 SYNGAP1Q96PV0 1343 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 ABHD16BQ9H3Z7 469 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 SEC63Q9UGP8 760 aaKnown RBP9.69□□□□□ -0.86
HERC4-203ENST00000395185 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 FAM184BQ9ULE4 1060 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 PCDHA1Q9Y5I3 950 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 ATP6V1DQ9Y5K8 247 aa9.69□□□□□ -0.86
HERC4-203ENST00000395185 MYH4Q9Y623 1939 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 ABCB11O95342 1321 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 SMCO2A6NFE2 343 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 PIK3CDO00329 1044 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 CYBAP13498 195 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 AKR1A1P14550 325 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 GNA11P29992 359 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 MCM4P33991 863 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 NLRP5P59047 1200 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 NR5A1Q13285 461 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 ACVR2BQ13705 512 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 BAATQ14032 418 aaPredicted RBP9.68□□□□□ -0.86
HERC4-203ENST00000395185 TRIM29Q14134 588 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
HERC4-203ENST00000395185 SAFBQ15424 915 aaKnown RBP eCLIP9.68□□□□□ -0.86
HERC4-203ENST00000395185 EARS2Q5JPH6 523 aaKnown RBP9.68□□□□□ -0.86
HERC4-203ENST00000395185 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 FAM173BQ6P4H8 233 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 HEATR3Q7Z4Q2 680 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 RNF180Q86T96 592 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 FERMT3Q86UX7 667 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 SAMD3Q8N6K7 520 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
HERC4-203ENST00000395185 CRYGNQ8WXF5 182 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 CLEC4DQ8WXI8 215 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 PIBF1Q8WXW3 757 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 CHAMP1Q96JM3 812 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 GLT8D2Q9H1C3 349 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 C11orf49Q9H6J7 331 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 A1CFQ9NQ94 594 aaKnown RBP9.68□□□□□ -0.86
HERC4-203ENST00000395185 PCDHA6Q9UN73 950 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 PCDHA8Q9Y5H6 950 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
HERC4-203ENST00000395185 KBTBD13C9JR72 458 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 MEIS2O14770 477 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 EVI5O60447 810 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 KRT2P35908 639 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 TRAPPC10P48553 1259 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 NAPAP54920 295 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 DNM1Q05193 864 aaKnown RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 USH1GQ495M9 461 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 FAM133AQ8N9E0 248 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 FOXD4L4Q8WXT5 416 aaPredicted RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 C6orf50Q9HD87 102 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 MAP3K20Q9NYL2 800 aaKnown RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 CYP39A1Q9NYL5 469 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 RTEL1Q9NZ71 1219 aa9.67□□□□□ -0.86
HERC4-203ENST00000395185 ZHX1Q9UKY1 873 aaPredicted RBP9.67□□□□□ -0.86
HERC4-203ENST00000395185 DNM1LO00429 736 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
HERC4-203ENST00000395185 IGHA2P01877 340 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 ZNF865P0CJ78 1059 aaPredicted RBP9.66□□□□□ -0.86
HERC4-203ENST00000395185 FOSBP53539 338 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 CNTN2Q02246 1040 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 PDE4DQ08499 809 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 PTPAQ15257 358 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 RILPL1Q5EBL4 403 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms