RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TFAMQ00059 246 aaKnown RBP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 MESDQ14696 234 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 ATP8B3O60423 1300 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 PRKAB2O43741 272 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 PNMA8AQ86V59 439 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 PARD3BQ8TEW8 1205 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 SGK1O00141 431 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 RBM6P78332 1123 aaKnown RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 CDKL2Q92772 493 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 HDAC11Q96DB2 347 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 PSAPP07602 524 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 KRT3P12035 628 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 GRAPQ13588 217 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 AK8Q96MA6 479 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 TRAPPC10P48553 1259 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 TTLL6Q8N841 843 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 TSC1Q92574 1164 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 GCC2Q8IWJ2 1684 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 CLIC2O15247 247 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 PPFIA4O75335 1185 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 AFPP02771 609 aaKnown RBP11.31□□□□□ -0.6
COL4A6-203ENST00000394872 RASSF2P50749 326 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 FAM186BQ8IYM0 893 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 BBOF1Q8ND07 529 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
COL4A6-203ENST00000394872 hCG_1984214I3L0E3 225 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 OSTNP61366 133 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 LRRC41Q15345 812 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF713Q8N859 430 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 C7orf31Q8N865 590 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 EEF2KMTQ96G04 330 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 PPP2R2CQ9Y2T4 447 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MYO1FO00160 1098 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 SLC4A1P02730 911 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MYL3P08590 195 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MARK3P27448 753 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 RASSF7Q02833 373 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 APOA5Q6Q788 366 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 RAPH1Q70E73 1250 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 TMEM206Q9H813 350 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 NAA35Q5VZE5 725 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 STK38LQ9Y2H1 464 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ARHGAP42A6NI28 874 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF233A6NK53 670 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ANXA13P27216 316 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ABCD1P33897 745 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MECOMQ03112 1051 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 TUBGCP2Q9BSJ2 902 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 SMYD2Q9NRG4 433 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ANGPTL3Q9Y5C1 460 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 BZW2Q9Y6E2 419 aaKnown RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 PASKQ96RG2 1323 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 KDM5CP41229 1560 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ABCC12Q96J65 1359 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 PPP6R2O75170 966 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 SNAP25P60880 206 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 UBE2SQ16763 222 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MYRIPQ8NFW9 859 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 UHMK1Q8TAS1 419 aaKnown RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 TRIM11Q96F44 468 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 CHMP6Q96FZ7 201 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MED7O43513 233 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MAPK4P31152 587 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 RNF10Q8N5U6 811 aaKnown RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 MAP4K1Q92918 833 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 GCNAQ96QF7 691 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF341Q9BYN7 854 aa11.3□□□□□ -0.6
COL4A6-203ENST00000394872 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
COL4A6-203ENST00000394872 HEG1Q9ULI3 1381 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 KDM5DQ9BY66 1539 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 C21orf2O43822 256 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 MYO1EQ12965 1108 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms