RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 F5H6K3 240 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 ICA1Q05084 483 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 KLRC3Q07444 240 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 AP3B2Q13367 1082 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L6PQ6QN14 398 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 DDX12PQ92771 950 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 FAM53CQ9NYF3 392 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 MEIS2O14770 477 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 NDUFA10O95299 355 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 ARHGAP25P42331 645 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 PPP2R3AQ06190 1150 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 DYMQ7RTS9 669 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 KDM3AQ9Y4C1 1321 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 LRRC63Q05C16 580 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 ABCB5Q2M3G0 1257 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 RSRC2Q7L4I2 434 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 DNAJC19Q96DA6 116 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 IQCDQ96DY2 449 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 NOC4LQ9BVI4 516 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 ARFGEF1Q9Y6D6 1849 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 CHRNA5P30532 468 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 MTIF2P46199 727 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 AOC3Q16853 763 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 TSR1Q2NL82 804 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
UBE2D3-207ENST00000394801 RGPD3A6NKT7 1758 aaPredicted RBP17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 RGPD4Q7Z3J3 1758 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 A0A1W2PQJ5 194 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 FGFR1OPO95684 399 aaKnown RBP17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 MMP14P50281 582 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 ZBED6P86452 979 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 ZNF569Q5MCW4 686 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 EEF2KMTQ96G04 330 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 AMNQ9BXJ7 453 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.33
UBE2D3-207ENST00000394801 MARCH6O60337 910 aa17.08■□□□□ 0.32
UBE2D3-207ENST00000394801 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
UBE2D3-207ENST00000394801 CDC23Q9UJX2 597 aa17.08■□□□□ 0.32
UBE2D3-207ENST00000394801 NDUFB10O96000 172 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 ABL1P00519 1130 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 TRIM21P19474 475 aaKnown RBP17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 CLCN6P51797 869 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 SLFN12Q8IYM2 578 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 GPR161Q8N6U8 529 aaKnown RBP17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 PRMT6Q96LA8 375 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 RAD21O60216 631 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 IDEP14735 1019 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 CDK17Q00537 523 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 GJA10Q969M2 543 aa17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-207ENST00000394801 TNS1Q9HBL0 1735 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 CTAGE9A4FU28 777 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 TBX3O15119 743 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 GDF11O95390 407 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 JAG1P78504 1218 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 VWA3BQ502W6 1294 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 FKBP15Q5T1M5 1219 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 RABGGTAQ92696 567 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 BMP2KQ9NSY1 1161 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 Q4G0T1 1027 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 LRRC55Q6ZSA7 311 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 P2RX7Q99572 595 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 NDST4Q9H3R1 872 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 ARGLU1Q9NWB6 273 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-207ENST00000394801 BMP3P12645 472 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 HNRNPH3P31942 346 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 ARHGAP4P98171 946 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 COASYQ13057 564 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 MAN2A1Q16706 1144 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 ZCWPW2Q504Y3 356 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 SRGAP1Q7Z6B7 1085 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms