RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SELENOOQ9BVL4 669 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 SPZ1Q9BXG8 430 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 ARHGAP20Q9P2F6 1191 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 C10orf71Q711Q0 1435 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 EPHB6O15197 1021 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 HNRNPH3P31942 346 aaKnown RBP20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 SPA17Q15506 151 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 CENPPQ6IPU0 288 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 CNNM4Q6P4Q7 775 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 CREG2Q8IUH2 290 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 SLC39A2Q9NP94 309 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 SNX12Q9UMY4 172 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 PLAGL2Q9UPG8 496 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 SIK3Q9Y2K2 1263 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 CAPN6Q9Y6Q1 641 aa20.39■□□□□ 0.86
PCDHA1-202ENST00000394633 SMCO2A6NFE2 343 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 LDHBP07195 334 aaKnown RBP20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 AMPD3Q01432 767 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 DIXDC1Q155Q3 683 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 GRIK5Q16478 980 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 CCDC96Q2M329 555 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 C15orf52Q6ZUT6 534 aaKnown RBP20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 NEK8Q86SG6 692 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 TGFBRAP1Q8WUH2 860 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 BBXQ8WY36 941 aaPredicted RBP20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 RASSF4Q9H2L5 321 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 SH2D4AQ9H788 454 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 MLXIPQ9HAP2 919 aa20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.85
PCDHA1-202ENST00000394633 AGPSO00116 658 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 GGCXP38435 758 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 VWA3BQ502W6 1294 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 TMC4Q7Z404 712 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 GOLGA6L1Q8N7Z2 621 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 JRKLQ9Y4A0 524 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 PCDHA13Q9Y5I0 950 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 SNED1Q8TER0 1413 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 IQCEQ6IPM2 695 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 AMOTL1Q8IY63 956 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 MMGT1Q8N4V1 131 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 TRIM58Q8NG06 486 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 CD209Q9NNX6 404 aa20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 SAP30BPQ9UHR5 308 aaKnown RBP20.38■□□□□ 0.85
PCDHA1-202ENST00000394633 RIMBP2O15034 1052 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 USO1O60763 962 aaKnown RBP20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 ZNF572Q7Z3I7 529 aaPredicted RBP20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 POTEDQ86YR6 584 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 AENQ8WTP8 325 aaKnown RBP20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 UPF1Q92900 1129 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 IQCDQ96DY2 449 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 CRACR2AQ9BSW2 395 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 IFIH1Q9BYX4 1025 aaKnown RBP20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 NDST4Q9H3R1 872 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 BLOC1S4Q9NUP1 217 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 TACC1O75410 805 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 MOCS3O95396 460 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 LCA5LO95447 670 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 KIF11P52732 1056 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 GRB10Q13322 594 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 TBCKQ8TEA7 893 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 CALML4Q96GE6 196 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 TRIM34Q9BYJ4 488 aa20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 FAM207AQ9NSI2 230 aaPredicted RBP20.37■□□□□ 0.85
PCDHA1-202ENST00000394633 MYMKA6NI61 221 aa20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 GNA11P29992 359 aa20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 EIF4A3P38919 411 aaKnown RBP20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 STYK1Q6J9G0 422 aa20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 MAPKAPK5Q8IW41 473 aa20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 SLC16A10Q8TF71 515 aa20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 HINFPQ9BQA5 517 aa20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 ATF5Q9Y2D1 282 aaPredicted RBP20.36■□□□□ 0.85
PCDHA1-202ENST00000394633 PPP4CP60510 307 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 USP17L2Q6R6M4 530 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 DPP8Q6V1X1 898 aaPredicted RBP20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 SV2BQ7L1I2 683 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 WDR66Q8TBY9 1149 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 HDAC7Q8WUI4 952 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 DRC1Q96MC2 740 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 PNMA5Q96PV4 448 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 BAG3O95817 575 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 PRLRP16471 622 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 TXKP42681 527 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 MAN2A1Q16706 1144 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 RRP36Q96EU6 259 aaKnown RBP20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 LRRC1Q9BTT6 524 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 TMEM260Q9NX78 707 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 BIN2Q9UBW5 565 aaPredicted RBP20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 FAM184BQ9ULE4 1060 aa20.35■□□□□ 0.85
PCDHA1-202ENST00000394633 ITIH3Q06033 890 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 UNC13DQ70J99 1090 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 MMRN2Q9H8L6 949 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 DMGDHQ9UI17 866 aaKnown RBP20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 IL1R1P14778 569 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 CCDC70Q6NSX1 233 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms