RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SLC5A9Q2M3M2 681 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 ACCSLQ4AC99 568 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 EIF1ADQ8N9N8 165 aaKnown RBP20.81■□□□□ 0.92
HOXC6-202ENST00000394331 ROBO1Q9Y6N7 1651 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 MYH14Q7Z406 1995 aaKnown RBP20.81■□□□□ 0.92
HOXC6-202ENST00000394331 PPIP5K2O43314 1243 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 AHCYL1O43865 530 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 TACC1O75410 805 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 FESP07332 822 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 TROAPQ12815 778 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 KIF5AQ12840 1032 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 TMED8Q6PL24 325 aaPredicted RBP20.81■□□□□ 0.92
HOXC6-202ENST00000394331 BARGINQ6ZT62 677 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 C3orf67Q6ZVT6 689 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 TAB2Q9NYJ8 693 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 RNF14Q9UBS8 474 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 SPATA31A5Q5VU36 1347 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 SPATA31A7Q8IWB4 1347 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 SKAP2O75563 359 aaPredicted RBP20.8■□□□□ 0.92
HOXC6-202ENST00000394331 RPS6KA3P51812 740 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 UBXN1Q04323 297 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 BYSLQ13895 437 aaKnown RBP20.8■□□□□ 0.92
HOXC6-202ENST00000394331 FBXO33Q7Z6M2 555 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 RCCD1A6NED2 376 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 IBSPP21815 317 aaPredicted RBP20.8■□□□□ 0.92
HOXC6-202ENST00000394331 MKRN4PQ13434 485 aaPredicted RBP20.8■□□□□ 0.92
HOXC6-202ENST00000394331 MB21D1Q8N884 522 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 RETREG2Q8NC44 543 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 HVCN1Q96D96 273 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 OSBPL9Q96SU4 736 aa20.8■□□□□ 0.92
HOXC6-202ENST00000394331 PDS5AQ29RF7 1337 aaKnown RBP20.8■□□□□ 0.92
HOXC6-202ENST00000394331 LGALS16A8MUM7 142 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 SLC7A5Q01650 507 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 KCNB1Q14721 858 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 USP17L12C9JPN9 530 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 USP17L21D6R901 530 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 SMIM22K7EJ46 135 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 ORC4O43929 436 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 BIRC3Q13489 604 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 TMTC3Q6ZXV5 915 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 USP49Q70CQ1 688 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 KIRREL3Q8IZU9 778 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 SHISA4Q96DD7 197 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 DUOX1Q9NRD9 1551 aa20.79■□□□□ 0.92
HOXC6-202ENST00000394331 OPLAHO14841 1288 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PRDM1O75626 825 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PLEKHA8P1O95397 391 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 HSPA9P38646 679 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PAK1Q13153 545 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 CDC37Q16543 378 aaPredicted RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PARD3BQ8TEW8 1205 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 NUP58Q9BVL2 599 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 MOV10L1Q9BXT6 1211 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PLCB1Q9NQ66 1216 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 CFAP73A6NFT4 308 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 GOLGA6L10A6NI86 522 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 WTIPA6NIX2 430 aaPredicted RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 MPHOSPH10O00566 681 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PAFAH1B1P43034 410 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 GKAP1Q5VSY0 366 aaPredicted RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 ZNF507Q8TCN5 953 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 NSUN4Q96CB9 384 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 CRNKL1Q9BZJ0 848 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 PPANQ9NQ55 473 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 ZNHIT6Q9NWK9 470 aaKnown RBP20.78■□□□□ 0.92
HOXC6-202ENST00000394331 CACNA1SQ13698 1873 aa20.78■□□□□ 0.92
HOXC6-202ENST00000394331 ALADP13716 330 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 RAB27AP51159 221 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 ZNF384Q8TF68 577 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
HOXC6-202ENST00000394331 STAMBPL1Q96FJ0 436 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 TFR2Q9UP52 801 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.77■□□□□ 0.92
HOXC6-202ENST00000394331 MYO1EQ12965 1108 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 CNKSR1Q969H4 720 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 L3MBTL3Q96JM7 780 aaPredicted RBP20.77■□□□□ 0.92
HOXC6-202ENST00000394331 TTYH3Q9C0H2 523 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 NUCKS1Q9H1E3 243 aaKnown RBP20.77■□□□□ 0.92
HOXC6-202ENST00000394331 NHEJ1Q9H9Q4 299 aaPredicted RBP20.77■□□□□ 0.92
HOXC6-202ENST00000394331 MYH13Q9UKX3 1938 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 COL4A1P02462 1669 aa20.77■□□□□ 0.92
HOXC6-202ENST00000394331 FAM205CA6NFA0 338 aa20.77■□□□□ 0.91
HOXC6-202ENST00000394331 RPS8P62241 208 aaKnown RBP20.77■□□□□ 0.91
HOXC6-202ENST00000394331 CCDC181Q5TID7 509 aa20.77■□□□□ 0.91
HOXC6-202ENST00000394331 NYXQ9GZU5 481 aa20.77■□□□□ 0.91
HOXC6-202ENST00000394331 ATP8A2Q9NTI2 1148 aa20.77■□□□□ 0.91
HOXC6-202ENST00000394331 NOP53Q9NZM5 478 aaKnown RBP20.77■□□□□ 0.91
HOXC6-202ENST00000394331 H7C1D1 291 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 KCNQ2O43526 872 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 USO1O60763 962 aaKnown RBP20.76■□□□□ 0.91
HOXC6-202ENST00000394331 SPDYE1Q8NFV5 336 aaPredicted RBP20.76■□□□□ 0.91
HOXC6-202ENST00000394331 ANKRD27Q96NW4 1050 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 ANKRD2Q9GZV1 360 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 EEF1GP26641 437 aaKnown RBP20.76■□□□□ 0.91
HOXC6-202ENST00000394331 MECOMQ03112 1051 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 EARS2Q5JPH6 523 aaKnown RBP20.76■□□□□ 0.91
HOXC6-202ENST00000394331 LINC00116Q8NCU8 138 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms