RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 SMARCC2Q8TAQ2 1214 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 BADQ92934 168 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 BRF1Q92994 677 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 CUL5Q93034 780 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 USP26Q9BXU7 913 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 POLR3EQ9NVU0 708 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 KIAA0355O15063 1070 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 ITGB8P26012 769 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 CCND2P30279 289 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 USP17L6PQ6QN14 398 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 VSIG10LQ86VR7 867 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 FAM126BQ8IXS8 530 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 TDHQ8IZJ6 230 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 MRVI1Q9Y6F6 885 aa26.69■■□□□ 1.86
HMGA2-202ENST00000393577 GRIN2DO15399 1336 aa26.68■■□□□ 1.86
HMGA2-202ENST00000393577 GH1P01241 217 aa26.68■■□□□ 1.86
HMGA2-202ENST00000393577 RCAN1P53805 252 aa26.68■■□□□ 1.86
HMGA2-202ENST00000393577 PURAQ00577 322 aaKnown RBP26.68■■□□□ 1.86
HMGA2-202ENST00000393577 HEATR3Q7Z4Q2 680 aa26.68■■□□□ 1.86
HMGA2-202ENST00000393577 SLC43A3Q8NBI5 491 aa26.68■■□□□ 1.86
HMGA2-202ENST00000393577 GPKOWQ92917 476 aaPredicted RBP eCLIP26.68■■□□□ 1.86
HMGA2-202ENST00000393577 ZFP91Q96JP5 570 aaPredicted RBP26.68■■□□□ 1.86
HMGA2-202ENST00000393577 FRMPD4Q14CM0 1322 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 A6NJR5 290 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 MEIS2O14770 477 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 TLR3O15455 904 aaKnown RBP26.67■■□□□ 1.86
HMGA2-202ENST00000393577 RGS20O76081 388 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 RAG1P15918 1043 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 CDC27P30260 824 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 METAP2P50579 478 aaKnown RBP eCLIP26.67■■□□□ 1.86
HMGA2-202ENST00000393577 ARHGAP1Q07960 439 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 FAM217BQ9NTX9 383 aaPredicted RBP26.67■■□□□ 1.86
HMGA2-202ENST00000393577 DDX41Q9UJV9 622 aaKnown RBP26.67■■□□□ 1.86
HMGA2-202ENST00000393577 MYH7BA7E2Y1 1941 aa26.67■■□□□ 1.86
HMGA2-202ENST00000393577 PIK3CDO00329 1044 aa26.66■■□□□ 1.86
HMGA2-202ENST00000393577 FUT2Q10981 343 aa26.66■■□□□ 1.86
HMGA2-202ENST00000393577 AFG1LQ8WV93 481 aa26.66■■□□□ 1.86
HMGA2-202ENST00000393577 MTG1Q9BT17 334 aaPredicted RBP26.66■■□□□ 1.86
HMGA2-202ENST00000393577 PSTPIP2Q9H939 334 aa26.66■■□□□ 1.86
HMGA2-202ENST00000393577 TBX21Q9UL17 535 aa26.66■■□□□ 1.86
HMGA2-202ENST00000393577 SCN10AQ9Y5Y9 1956 aa26.66■■□□□ 1.86
HMGA2-202ENST00000393577 WWC2Q6AWC2 1192 aa26.65■■□□□ 1.86
HMGA2-202ENST00000393577 FBXL16Q8N461 479 aa26.65■■□□□ 1.86
HMGA2-202ENST00000393577 AGXT2Q9BYV1 514 aa26.65■■□□□ 1.86
HMGA2-202ENST00000393577 LAMA3Q16787 3333 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 SOX1O00570 391 aaPredicted RBP26.64■■□□□ 1.86
HMGA2-202ENST00000393577 KPNA6O60684 536 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 CD4P01730 458 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 MMP3P08254 477 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 UBE2SQ16763 222 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 RUFY3Q7L099 469 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 SEZ6LQ9BYH1 1024 aa26.64■■□□□ 1.86
HMGA2-202ENST00000393577 V9GY48 417 aaPredicted RBP26.64■■□□□ 1.86
HMGA2-202ENST00000393577 ADD1P35611 737 aaKnown RBP26.63■■□□□ 1.85
HMGA2-202ENST00000393577 MRPS9P82933 396 aaKnown RBP26.63■■□□□ 1.85
HMGA2-202ENST00000393577 KCNV1Q6PIU1 500 aa26.63■■□□□ 1.85
HMGA2-202ENST00000393577 ZSWIM6Q9HCJ5 1215 aa26.63■■□□□ 1.85
HMGA2-202ENST00000393577 NID2Q14112 1375 aa26.62■■□□□ 1.85
HMGA2-202ENST00000393577 CCDC196A0A1B0GTZ2 297 aa26.62■■□□□ 1.85
HMGA2-202ENST00000393577 SORBS3O60504 671 aa26.62■■□□□ 1.85
HMGA2-202ENST00000393577 DHX37Q8IY37 1157 aaKnown RBP26.62■■□□□ 1.85
HMGA2-202ENST00000393577 CYP46A1Q9Y6A2 500 aa26.62■■□□□ 1.85
HMGA2-202ENST00000393577 B4GALT4O60513 344 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 TIMP1P01033 207 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 NAPAP54920 295 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 LAMC2Q13753 1193 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 NBPF20Q3BBV1 942 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 GNPTABQ3T906 1256 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 TYW1BQ6NUM6 668 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 PPP1R13LQ8WUF5 828 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 EMID1Q96A84 441 aaPredicted RBP26.61■■□□□ 1.85
HMGA2-202ENST00000393577 PPP1R12CQ9BZL4 782 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 TRPV6Q9H1D0 765 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 ALDH8A1Q9H2A2 487 aaPredicted RBP26.61■■□□□ 1.85
HMGA2-202ENST00000393577 RTEL1Q9NZ71 1219 aa26.61■■□□□ 1.85
HMGA2-202ENST00000393577 STAM2O75886 525 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 GGPS1O95749 300 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 UBA1P22314 1058 aaKnown RBP26.6■■□□□ 1.85
HMGA2-202ENST00000393577 LRIT3Q3SXY7 679 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 FAM47CQ5HY64 1035 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 PCNX4Q63HM2 1172 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 LRCH3Q96II8 777 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 INPP4AQ96PE3 977 aaPredicted RBP26.6■■□□□ 1.85
HMGA2-202ENST00000393577 UPF3BQ9BZI7 483 aaKnown RBP26.6■■□□□ 1.85
HMGA2-202ENST00000393577 TM6SF1Q9BZW5 370 aa26.6■■□□□ 1.85
HMGA2-202ENST00000393577 STXBP3O00186 592 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 TGFB3P10600 412 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 CHMP4BP1P59074 171 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 SP2Q02086 613 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 FPGSQ05932 587 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 TOB2Q14106 344 aaPredicted RBP26.59■■□□□ 1.85
HMGA2-202ENST00000393577 DGKDQ16760 1214 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 C9orf50Q5SZB4 431 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 CELF3Q5SZQ8 465 aaKnown RBP26.59■■□□□ 1.85
HMGA2-202ENST00000393577 PPP1R18Q6NYC8 613 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 PPTC7Q8NI37 304 aa26.59■■□□□ 1.85
HMGA2-202ENST00000393577 DOCK5Q9H7D0 1870 aa26.58■■□□□ 1.85
HMGA2-202ENST00000393577 SPDYE3A6NKU9 549 aa26.58■■□□□ 1.85
HMGA2-202ENST00000393577 hCG_1984214I3L0E3 225 aa26.58■■□□□ 1.85
HMGA2-202ENST00000393577 SHHQ15465 462 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms