RNA–Protein interactions for RNA: ENST00000392495.7

SPPL3-202, Transcript of signal peptide peptidase like 3, humanhuman

TSL 2

Gene SPPL3, Length 2,265 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-202ENST00000392495 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
SPPL3-202ENST00000392495 IDEP14735 1019 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 USP14P54578 494 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 FKBP15Q5T1M5 1219 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
SPPL3-202ENST00000392495 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
SPPL3-202ENST00000392495 DNAJC19Q96DA6 116 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 GJD4Q96KN9 370 aaPredicted RBP13.05□□□□□ -0.32
SPPL3-202ENST00000392495 CAPZA3Q96KX2 299 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
SPPL3-202ENST00000392495 ADAM21Q9UKJ8 722 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 ERLIN1O75477 346 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 VAV2P52735 878 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 CASP8Q14790 479 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 CDK5RAP3Q96JB5 506 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 FGFBP2Q9BYJ0 223 aa13.05□□□□□ -0.32
SPPL3-202ENST00000392495 LRRIQ3A6PVS8 624 aaPredicted RBP13.04□□□□□ -0.32
SPPL3-202ENST00000392495 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 MAN2A1Q16706 1144 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 KRT79Q5XKE5 535 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 KCTD1Q719H9 257 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 BAP1Q92560 729 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 MTMR8Q96EF0 704 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 DDX25Q9UHL0 483 aaKnown RBP13.04□□□□□ -0.32
SPPL3-202ENST00000392495 SCNN1DP51172 638 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 LRRC63Q05C16 580 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 NFIAQ12857 509 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 SHROOM1Q2M3G4 852 aaPredicted RBP13.04□□□□□ -0.32
SPPL3-202ENST00000392495 ZCWPW2Q504Y3 356 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
SPPL3-202ENST00000392495 ABCB11O95342 1321 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 SIPA1L1O43166 1804 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 ANO9A1A5B4 782 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
SPPL3-202ENST00000392495 IPO7O95373 1038 aaKnown RBP13.03□□□□□ -0.32
SPPL3-202ENST00000392495 LCA5LO95447 670 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 KCNMA1Q12791 1236 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 ZFPM1Q8IX07 1006 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 MMRN2Q9H8L6 949 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
SPPL3-202ENST00000392495 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
SPPL3-202ENST00000392495 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 ZBTB5O15062 677 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 ONECUT3O60422 494 aaPredicted RBP13.02□□□□□ -0.32
SPPL3-202ENST00000392495 TUBBP07437 444 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.32
SPPL3-202ENST00000392495 KIF11P52732 1056 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 COASYQ13057 564 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.32
SPPL3-202ENST00000392495 CUL5Q93034 780 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.32
SPPL3-202ENST00000392495 DNAJC18Q9H819 358 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 MLXIPQ9HAP2 919 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 SWAP70Q9UH65 585 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 PCDHA13Q9Y5I0 950 aa13.02□□□□□ -0.32
SPPL3-202ENST00000392495 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 ZMYND10O75800 440 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 PSMD2Q13200 908 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 ASTE1Q2TB18 679 aaPredicted RBP13.02□□□□□ -0.33
SPPL3-202ENST00000392495 USP17L6PQ6QN14 398 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 RRAGAQ7L523 313 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 CCDC84Q86UT8 332 aaPredicted RBP13.02□□□□□ -0.33
SPPL3-202ENST00000392495 CREG2Q8IUH2 290 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 SECISBP2LQ93073 1101 aaKnown RBP13.02□□□□□ -0.33
SPPL3-202ENST00000392495 IQCDQ96DY2 449 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 SH2D4AQ9H788 454 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 PSTPIP2Q9H939 334 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
SPPL3-202ENST00000392495 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms