RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TMEM265A0A087WTH1 108 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 SORBS3O60504 671 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 NR3C2P08235 984 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 MMP3P08254 477 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 WTAPQ15007 396 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 DEFB128Q7Z7B8 93 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 NCOA7Q8NI08 942 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 IL31RAQ8NI17 732 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 IWS1Q96ST2 819 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 RBM8AQ9Y5S9 174 aaKnown RBP19.28■□□□□ 0.68
PTPRK-208ENST00000392449 MYH7BA7E2Y1 1941 aa19.27■□□□□ 0.68
PTPRK-208ENST00000392449 CUL9Q8IWT3 2517 aa19.27■□□□□ 0.68
PTPRK-208ENST00000392449 TANC1Q9C0D5 1861 aa19.27■□□□□ 0.68
PTPRK-208ENST00000392449 GH1P01241 217 aa19.27■□□□□ 0.67
PTPRK-208ENST00000392449 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.67
PTPRK-208ENST00000392449 RABGGTBP53611 331 aa19.27■□□□□ 0.67
PTPRK-208ENST00000392449 TROAPQ12815 778 aa19.27■□□□□ 0.67
PTPRK-208ENST00000392449 TMEM67Q5HYA8 995 aa19.27■□□□□ 0.67
PTPRK-208ENST00000392449 MAP4K1Q92918 833 aa19.27■□□□□ 0.67
PTPRK-208ENST00000392449 MYL10Q9BUA6 226 aa19.27■□□□□ 0.67
PTPRK-208ENST00000392449 ERICH2A1L162 156 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 RGS20O76081 388 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 SUPT20HL2P0C7V6 817 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 NFRKBQ6P4R8 1299 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 MB21D2Q8IYB1 491 aaPredicted RBP19.26■□□□□ 0.67
PTPRK-208ENST00000392449 KAT2BQ92831 832 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 PDCD2LQ9BRP1 358 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 RIOX1Q9H6W3 641 aa19.26■□□□□ 0.67
PTPRK-208ENST00000392449 DDX41Q9UJV9 622 aaKnown RBP19.26■□□□□ 0.67
PTPRK-208ENST00000392449 YBX2Q9Y2T7 364 aaKnown RBP19.26■□□□□ 0.67
PTPRK-208ENST00000392449 ZBBXA8MT70 800 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 KPNA6O60684 536 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 MYOGP15173 224 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 GHRHRQ02643 423 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 USP38Q8NB14 1042 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 IGDCC4Q8TDY8 1250 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 CTAGE1Q96RT6 745 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 MAF1Q9H063 256 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 NKX2-4Q9H2Z4 354 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 PRDM12Q9H4Q4 367 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 MRVI1Q9Y6F6 885 aa19.25■□□□□ 0.67
PTPRK-208ENST00000392449 TRIP12Q14669 1992 aaPredicted RBP19.25■□□□□ 0.67
PTPRK-208ENST00000392449 EIF3JO75822 258 aaKnown RBP19.24■□□□□ 0.67
PTPRK-208ENST00000392449 ZNF286BP0CG31 522 aa19.24■□□□□ 0.67
PTPRK-208ENST00000392449 PGM5Q15124 567 aa19.24■□□□□ 0.67
PTPRK-208ENST00000392449 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
PTPRK-208ENST00000392449 GPKOWQ92917 476 aaPredicted RBP eCLIP19.24■□□□□ 0.67
PTPRK-208ENST00000392449 COL25A1Q9BXS0 654 aaPredicted RBP19.24■□□□□ 0.67
PTPRK-208ENST00000392449 MYO9BQ13459 2157 aa19.24■□□□□ 0.67
PTPRK-208ENST00000392449 SART3Q15020 963 aaKnown RBP19.23■□□□□ 0.67
PTPRK-208ENST00000392449 GDF6Q6KF10 455 aaPredicted RBP19.23■□□□□ 0.67
PTPRK-208ENST00000392449 RPUSD2Q8IZ73 545 aaKnown RBP19.23■□□□□ 0.67
PTPRK-208ENST00000392449 LSG1Q9H089 658 aaKnown RBP19.23■□□□□ 0.67
PTPRK-208ENST00000392449 MTIF3Q9H2K0 278 aaKnown RBP19.23■□□□□ 0.67
PTPRK-208ENST00000392449 LY9Q9HBG7 655 aa19.23■□□□□ 0.67
PTPRK-208ENST00000392449 NOD1Q9Y239 953 aa19.23■□□□□ 0.67
PTPRK-208ENST00000392449 TET1Q8NFU7 2136 aa19.23■□□□□ 0.67
PTPRK-208ENST00000392449 PTGISQ16647 500 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 CATIPQ7Z7H3 387 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 ALG1Q9BT22 464 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 MSRAQ9UJ68 235 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 SLC4A7Q9Y6M7 1214 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 SPTBN5Q9NRC6 3674 aaKnown RBP19.22■□□□□ 0.67
PTPRK-208ENST00000392449 PNMA6FA0A0J9YX94 578 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 GCOM1H8Y6P7 765 aaPredicted RBP19.22■□□□□ 0.67
PTPRK-208ENST00000392449 IQCF3P0C7M6 154 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 POLR2MP0CAP2 368 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 CASTP20810 708 aaKnown RBP19.22■□□□□ 0.67
PTPRK-208ENST00000392449 SP2Q02086 613 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 DGKDQ16760 1214 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 DHX37Q8IY37 1157 aaKnown RBP19.22■□□□□ 0.67
PTPRK-208ENST00000392449 ZNF654Q8IZM8 581 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 DHX38Q92620 1227 aaKnown RBP19.22■□□□□ 0.67
PTPRK-208ENST00000392449 BCAS3Q9H6U6 928 aa19.22■□□□□ 0.67
PTPRK-208ENST00000392449 DOCK5Q9H7D0 1870 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 PRC1O43663 620 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 RXRAP19793 462 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 PTPN11Q06124 597 aaPredicted RBP19.21■□□□□ 0.67
PTPRK-208ENST00000392449 RAB30Q15771 203 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 VSIG10LQ86VR7 867 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 CMTR1Q8N1G2 835 aaKnown RBP19.21■□□□□ 0.67
PTPRK-208ENST00000392449 PPM1EQ8WY54 764 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 EMID1Q96A84 441 aaPredicted RBP19.21■□□□□ 0.67
PTPRK-208ENST00000392449 ESYT1Q9BSJ8 1104 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 PRDM6Q9NQX0 595 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 HDAC6Q9UBN7 1215 aa19.21■□□□□ 0.67
PTPRK-208ENST00000392449 REV3LO60673 3130 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 PITPNM1O00562 1244 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 PLEKHA8P1O95397 391 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 ATP2A2P16615 1042 aaKnown RBP19.2■□□□□ 0.66
PTPRK-208ENST00000392449 UBA1P22314 1058 aaKnown RBP19.2■□□□□ 0.66
PTPRK-208ENST00000392449 PSEN2P49810 448 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 ADGRE1Q14246 886 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 HSDL1Q3SXM5 330 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 RETREG2Q8NC44 543 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 PPTC7Q8NI37 304 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 LRRC2Q9BYS8 371 aa19.2■□□□□ 0.66
PTPRK-208ENST00000392449 PTPRSQ13332 1948 aa19.19■□□□□ 0.66
PTPRK-208ENST00000392449 SLC27A2O14975 620 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms