RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 IGLV3-22A0A075B6J6 115 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZNF76P36508 570 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 HMGCS2P54868 508 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZC3H15Q8WU90 426 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 LARP4BQ92615 738 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 MED15Q96RN5 788 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 FANCLQ9NW38 375 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 SNCAIPQ9Y6H5 919 aa12.85□□□□□ -0.35
SMARCAL1-203ENST00000392128 VWA5AO00534 786 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 MSH4O15457 936 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 RHOBTB3O94955 611 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 FANCCQ00597 558 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 SH3D19Q5HYK7 790 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 SV2BQ7L1I2 683 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 RAD54LQ92698 747 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 RAVER2Q9HCJ3 691 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 RRAGDQ9NQL2 400 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 ADAMTS5Q9UNA0 930 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 CTDP1Q9Y5B0 961 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 RPTORQ8N122 1335 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 NFIBO00712 420 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 ATP1A3P13637 1013 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZNF18P17022 549 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 VGLL4Q14135 290 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 CNNM4Q6P4Q7 775 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 KRT26Q7Z3Y9 468 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 SMYD4Q8IYR2 804 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 CPXCR1Q8N123 301 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 LRRC27Q9C0I9 530 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
SMARCAL1-203ENST00000392128 ALAS1P13196 640 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 DSG3P32926 999 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 EPHX2P34913 555 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 OAZ1P54368 228 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 SPATA1Q5VX52 437 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 TRMT44Q8IYL2 757 aaKnown RBP12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 REPS2Q8NFH8 660 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 CYP2W1Q8TAV3 490 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 CCDC47Q96A33 483 aaKnown RBP12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 ATG4CQ96DT6 458 aa12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 XPO4Q9C0E2 1151 aaKnown RBP12.83□□□□□ -0.35
SMARCAL1-203ENST00000392128 MYPNQ86TC9 1320 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 LOC285556D6RIA3 1793 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 PRKG1Q13976 671 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 COG2Q14746 738 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 ECM1Q16610 540 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 CEP55Q53EZ4 464 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 GIMAP8Q8ND71 665 aaPredicted RBP12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 ERMNQ8TAM6 284 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 RWDD2AQ9UIY3 292 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 VAV3Q9UKW4 847 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
SMARCAL1-203ENST00000392128 GLTPD2A6NH11 291 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 CBFA2T2O43439 604 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 IREB2P48200 963 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 MCM6Q14566 821 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 DLK2Q6UY11 383 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 KCNK18Q7Z418 384 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 COL20A1Q9P218 1284 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 GDAQ9Y2T3 454 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 CSADQ9Y600 493 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 SERPINC1P01008 464 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 STAT3P40763 770 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 ASIC1P78348 528 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 PAK1Q13153 545 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 GPR162Q16538 588 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 ILDR2Q71H61 639 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 CCDC186Q7Z3E2 898 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 ADSSL1Q8N142 457 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 WNK4Q96J92 1243 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 CTNND2Q9UQB3 1225 aa12.82□□□□□ -0.36
SMARCAL1-203ENST00000392128 MYMKA6NI61 221 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 MEIS1O00470 390 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms