RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 CCDC70Q6NSX1 233 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 CHADLQ6NUI6 762 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 NELFCDQ8IXH7 590 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 NOC3LQ8WTT2 800 aaKnown RBP19.94■□□□□ 0.78
ERCC2-201ENST00000391941 A0A087WUV0 522 aaPredicted RBP19.94■□□□□ 0.78
ERCC2-201ENST00000391941 IRX3P78415 501 aaPredicted RBP19.94■□□□□ 0.78
ERCC2-201ENST00000391941 PARP10Q53GL7 1025 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 TBCKQ8TEA7 893 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 TGFBRAP1Q8WUH2 860 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 CCSER1Q9C0I3 900 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 SMCO2A6NFE2 343 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 KLRF2D3W0D1 207 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 HSF2BPO75031 334 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 TDP2O95551 362 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 EIF6P56537 245 aaKnown RBP19.93■□□□□ 0.78
ERCC2-201ENST00000391941 HYOU1Q9Y4L1 999 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 SLC37A4O43826 429 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 IQCEQ6IPM2 695 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 AMOTL1Q8IY63 956 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 ERGIC2Q96RQ1 377 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 TMEM47Q9BQJ4 181 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 FRMPD2Q68DX3 1309 aaPredicted RBP19.93■□□□□ 0.78
ERCC2-201ENST00000391941 SHTN1A0MZ66 631 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 TLR2O60603 784 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 MYL1P05976 194 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 HNRNPH1P31943 449 aaKnown RBP19.93■□□□□ 0.78
ERCC2-201ENST00000391941 DZIP1Q86YF9 867 aaKnown RBP19.93■□□□□ 0.78
ERCC2-201ENST00000391941 FNBP4Q8N3X1 1017 aaPredicted RBP19.93■□□□□ 0.78
ERCC2-201ENST00000391941 BAP1Q92560 729 aa19.93■□□□□ 0.78
ERCC2-201ENST00000391941 KLRC1P26715 233 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 MNAT1P51948 309 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 UBE4AQ14139 1066 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 TMED8Q6PL24 325 aaPredicted RBP19.92■□□□□ 0.78
ERCC2-201ENST00000391941 SH3GL2Q99962 352 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 LRRC4CQ9HCJ2 640 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 BLOC1S4Q9NUP1 217 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 BARHL2Q9NY43 387 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 NPHP3-ACAD11A0A0J9YXS1 232 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 BICDL2A1A5D9 508 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 KCNQ2O43526 872 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 INPP5BP32019 993 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 KCNMA1Q12791 1236 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 ECM1Q16610 540 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 ZSCAN29Q8IWY8 852 aaPredicted RBP19.92■□□□□ 0.78
ERCC2-201ENST00000391941 CASKIN2Q8WXE0 1202 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 COA7Q96BR5 231 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 PIGSQ96S52 555 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 SH3GLB2Q9NR46 395 aa19.92■□□□□ 0.78
ERCC2-201ENST00000391941 PAFAH1B1P43034 410 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 POLR2FP61218 127 aaKnown RBP19.91■□□□□ 0.78
ERCC2-201ENST00000391941 GRB10Q13322 594 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 RNF187Q5TA31 235 aaPredicted RBP19.91■□□□□ 0.78
ERCC2-201ENST00000391941 TSGA10Q9BZW7 698 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 LOC102724428A0A0B4J2F2 783 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 EPHB4P54760 987 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 SIK1P57059 783 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 PIK3R5Q8WYR1 880 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 TBC1D5Q92609 795 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 ALS2CR12Q96Q35 445 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 ADAMTS1Q9UHI8 967 aa19.91■□□□□ 0.78
ERCC2-201ENST00000391941 GUCY2CP25092 1073 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 CDK17Q00537 523 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 HGSNATQ68CP4 663 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 MAATS1Q7Z4T9 603 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 FAM114A1Q8IWE2 563 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 PNMA5Q96PV4 448 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 PPANQ9NQ55 473 aaKnown RBP19.9■□□□□ 0.78
ERCC2-201ENST00000391941 DLEC1Q9Y238 1755 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 A0A1W2PQJ5 194 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 ATP2C2O75185 946 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 HIBADHP31937 336 aaKnown RBP19.9■□□□□ 0.78
ERCC2-201ENST00000391941 HDLBPQ00341 1268 aaKnown RBP19.9■□□□□ 0.78
ERCC2-201ENST00000391941 CFAP58Q5T655 872 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 AP1M1Q9BXS5 423 aa19.9■□□□□ 0.78
ERCC2-201ENST00000391941 BCCIPQ9P287 314 aaKnown RBP eCLIP19.9■□□□□ 0.78
ERCC2-201ENST00000391941 SLURP2P0DP57 97 aa19.89■□□□□ 0.78
ERCC2-201ENST00000391941 GRM4Q14833 912 aa19.89■□□□□ 0.78
ERCC2-201ENST00000391941 ATP8A2Q9NTI2 1148 aa19.89■□□□□ 0.78
ERCC2-201ENST00000391941 ACTN1P12814 892 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 FIGNQ5HY92 759 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 MMS22LQ6ZRQ5 1243 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 FAM133AQ8N9E0 248 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 C7orf25Q9BPX7 421 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 ARPP21Q9UBL0 812 aaPredicted RBP19.89■□□□□ 0.77
ERCC2-201ENST00000391941 A0A087X0T9 212 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 GOLGA8KD6RF30 607 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 FAM228BP0C875 321 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 LSP1P33241 339 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 RAPGEF1Q13905 1077 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 HLTFQ14527 1009 aaKnown RBP eCLIP19.89■□□□□ 0.77
ERCC2-201ENST00000391941 CENPPQ6IPU0 288 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 CCDC47Q96A33 483 aaKnown RBP19.89■□□□□ 0.77
ERCC2-201ENST00000391941 ZHX3Q9H4I2 956 aa19.89■□□□□ 0.77
ERCC2-201ENST00000391941 H0YHG0 523 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 RAD51CO43502 376 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 NONOQ15233 471 aaKnown RBP eCLIP19.88■□□□□ 0.772e-13■■■□□ 17.5
ERCC2-201ENST00000391941 SPRED3Q2MJR0 410 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 C12orf60Q5U649 245 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 DDX12PQ92771 950 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 LSM14BQ9BX40 385 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms