RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 ZNF445P59923 1031 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 NKX3-2P78367 333 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 CWF19L2Q2TBE0 894 aaKnown RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 ANKRD39Q53RE8 183 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 COLEC12Q5KU26 742 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 RALYLQ86SE5 291 aaKnown RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 PRIMA1Q86XR5 153 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 FBXO27Q8NI29 283 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 NTN5Q8WTR8 489 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 DHRS1Q96LJ7 313 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 TMEM74Q96NL1 305 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 LRRC37BQ96QE4 947 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 WRNIP1Q96S55 665 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 TTPALQ9BTX7 342 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 ZNF703Q9H7S9 590 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 EHMT1Q9H9B1 1298 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SLC2A4RGQ9NR83 387 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 ADARB2Q9NS39 739 aaKnown RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 PTGFRNQ9P2B2 879 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 GULP1Q9UBP9 304 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 TMEFF2Q9UIK5 374 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SF3B6Q9Y3B4 125 aaKnown RBP2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 PCDHB14Q9Y5E9 798 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SLC4A7Q9Y6M7 1214 aa2.04□□□□□ -2.08
RNU6-1239P-201ENST00000391310 TNFRSF10CO14798 259 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SGSM2O43147 1006 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 NME1P15531 152 aaKnown RBP2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SLC6A11P48066 632 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 TAF1CQ15572 869 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 EPHA10Q5JZY3 1008 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 NOL9Q5SY16 702 aaKnown RBP2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 ZNF362Q5T0B9 420 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 LCE1AQ5T7P2 110 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 MAMDC4Q6UXC1 1216 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 FAM196AQ6ZSG2 479 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 TAX1BP1Q86VP1 789 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 FUKQ8N0W3 1084 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 FIBCD1Q8N539 461 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 GOLM1Q8NBJ4 401 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 PLEKHO2Q8TD55 490 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SEC14L1Q92503 715 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 FAM89AQ96GI7 184 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 ASB16Q96NS5 453 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 BRIP1Q9BX63 1249 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 LRRC3Q9BY71 257 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 GP6Q9HCN6 339 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 AURKAIP1Q9NWT8 199 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SUCOQ9UBS9 1254 aaKnown RBP2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 SLC30A1Q9Y6M5 507 aa2.03□□□□□ -2.08
RNU6-1239P-201ENST00000391310 ROBO2Q9HCK4 1378 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 TMEM191CA6NGB0 347 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 C9IYK1 514 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 F6X3S4 739 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 FUCA1P04066 466 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 P4HBP07237 508 aaKnown RBP2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 CDK4P11802 303 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 DNAJA1P31689 397 aaKnown RBP2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 FAM160A1Q05DH4 1040 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 SNAP47Q5SQN1 464 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 SYCE2Q6PIF2 218 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 Q6ZUG5 572 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 POLNQ7Z5Q5 900 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 CCDC144CPQ8IYA2 1237 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 BRF1Q92994 677 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 CLIP3Q96DZ5 547 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 NEIL1Q96FI4 390 aaPredicted RBP2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 ZSWIM3Q96MP5 696 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 TMEM209Q96SK2 561 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 BRMS1Q9HCU9 246 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 CROTQ9UKG9 612 aa2.02□□□□□ -2.09
RNU6-1239P-201ENST00000391310 TRBV23OR9-2A0A075B6M9 112 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 A0A087WZG4 1122 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 C7orf72A4D263 438 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 MEIS3P2A8K0S8 358 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 AURKAO14965 403 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 TLR3O15455 904 aaKnown RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 PRPF40AO75400 957 aaKnown RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 KLHL18O94889 574 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 NUDT3O95989 172 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 COL6A1P12109 1028 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 GARTP22102 1010 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 CTGFP29279 349 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 GBP2P32456 591 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 PMS1P54277 932 aaKnown RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 PWP1Q13610 501 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 LRRFIP1Q32MZ4 808 aaKnown RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 DCAF15Q66K64 600 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 LAIR1Q6GTX8 287 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 TRMT10BQ6PF06 316 aaKnown RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 MILR1Q7Z6M3 343 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 IFNL2Q8IZJ0 200 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 NUDT10Q8NFP7 164 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 SMARCC1Q92922 1105 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 NUDT11Q96G61 164 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 SLC9A7Q96T83 725 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 YIPF4Q9BSR8 244 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 RSRP1Q9BUV0 290 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 KRTAP1-5Q9BYS1 174 aa2.01□□□□□ -2.09
RNU6-1239P-201ENST00000391310 USP31Q70CQ4 1352 aa2□□□□□ -2.09
RNU6-1239P-201ENST00000391310 NPHP3-ACAD11A0A0J9YXS1 232 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms