RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
LRCH1-202ENST00000389797 EMBQ6PCB8 327 aa17.12■□□□□ 0.33
LRCH1-202ENST00000389797 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
LRCH1-202ENST00000389797 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 FLT1P17948 1338 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 MYH10P35580 1976 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 EIF4A3P38919 411 aaKnown RBP17.11■□□□□ 0.33
LRCH1-202ENST00000389797 ALS2CLQ60I27 953 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
LRCH1-202ENST00000389797 CCDC84Q86UT8 332 aaPredicted RBP17.11■□□□□ 0.33
LRCH1-202ENST00000389797 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
LRCH1-202ENST00000389797 STIM2Q9P246 746 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 CPP00450 1065 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 DDR1Q08345 913 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 VWA3BQ502W6 1294 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 BCAS4Q8TDM0 211 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 MMRN2Q9H8L6 949 aa17.11■□□□□ 0.33
LRCH1-202ENST00000389797 MAGEA1P43355 309 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 SLC7A5Q01650 507 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 RRP36Q96EU6 259 aaKnown RBP17.1■□□□□ 0.33
LRCH1-202ENST00000389797 SH3GL2Q99962 352 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 NDST4Q9H3R1 872 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 HSF2BPO75031 334 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 NT5C2P49902 561 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 NFRKBQ6P4R8 1299 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
LRCH1-202ENST00000389797 ANKRD31Q8N7Z5 1873 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 A6NNZ2 444 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 STXBP3O00186 592 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 EIF3HO15372 352 aaKnown RBP eCLIP17.09■□□□□ 0.33
LRCH1-202ENST00000389797 LCA5LO95447 670 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
LRCH1-202ENST00000389797 GNGT1P63211 74 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
LRCH1-202ENST00000389797 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 SLC4A8Q2Y0W8 1093 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 TUBB8Q3ZCM7 444 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 COBLL1Q53SF7 1204 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 CENPPQ6IPU0 288 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 PSMB7Q99436 277 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 IL17RBQ9NRM6 502 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 PRDX5P30044 214 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 CXCR5P32302 372 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 GTF2A1P52655 376 aaPredicted RBP17.09■□□□□ 0.33
LRCH1-202ENST00000389797 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 SEMA6BQ9H3T3 888 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 CCNT1O60563 726 aaKnown RBP17.09■□□□□ 0.33
LRCH1-202ENST00000389797 SERPINB2P05120 415 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 C8orf74Q6P047 294 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 KIAA0895Q8NCT3 520 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 LAMB1P07942 1786 aa17.09■□□□□ 0.33
LRCH1-202ENST00000389797 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.33
LRCH1-202ENST00000389797 MRPS25P82663 173 aaKnown RBP17.08■□□□□ 0.33
LRCH1-202ENST00000389797 NONOQ15233 471 aaKnown RBP eCLIP17.08■□□□□ 0.333e-6■■■□□ 19.1
LRCH1-202ENST00000389797 RRAGAQ7L523 313 aa17.08■□□□□ 0.33
LRCH1-202ENST00000389797 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.33
LRCH1-202ENST00000389797 FAM169AQ9Y6X4 670 aa17.08■□□□□ 0.33
LRCH1-202ENST00000389797 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.322e-6■□□□□ 8.4
LRCH1-202ENST00000389797 CYTH3O43739 400 aa17.08■□□□□ 0.32
LRCH1-202ENST00000389797 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
LRCH1-202ENST00000389797 POLRMTO00411 1230 aaKnown RBP17.08■□□□□ 0.32
LRCH1-202ENST00000389797 EPHB6O15197 1021 aa17.08■□□□□ 0.32
LRCH1-202ENST00000389797 GLE1Q53GS7 698 aaKnown RBP17.08■□□□□ 0.32
LRCH1-202ENST00000389797 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
LRCH1-202ENST00000389797 CAVIN3Q969G5 261 aa17.08■□□□□ 0.32
LRCH1-202ENST00000389797 JAG2Q9Y219 1238 aa17.08■□□□□ 0.32
LRCH1-202ENST00000389797 PJA2O43164 708 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 TNFRSF8P28908 595 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 TECP42680 631 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 NOX5Q96PH1 765 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 LZTS2Q9BRK4 669 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 LRRC53A6NM62 1247 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 ERLIN2O94905 339 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 NAPAP54920 295 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 GPR101Q96P66 508 aaPredicted RBP17.07■□□□□ 0.32
LRCH1-202ENST00000389797 ZMYND12Q9H0C1 365 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 EHD4Q9H223 541 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 SMARCAL1Q9NZC9 954 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 ABCB11O95342 1321 aa17.07■□□□□ 0.32
LRCH1-202ENST00000389797 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
LRCH1-202ENST00000389797 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms