RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 IFRD2Q12894 506 aaPredicted RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 GIMAP8Q8ND71 665 aaPredicted RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 NSUN6Q8TEA1 469 aaKnown RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 MAIP1Q8WWC4 291 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 NT5C1BQ96P26 610 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 IGSF3O75054 1194 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 NTSR2O95665 410 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 JAK3P52333 1124 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 MYL7Q01449 175 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 CUL4AQ13619 759 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 ATG9AQ7Z3C6 839 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 PRPF38AQ8NAV1 312 aaKnown RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 ASIC3Q9UHC3 531 aa11.27□□□□□ -0.61
PKP4-201ENST00000389757 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.61
PKP4-201ENST00000389757 STAM2O75886 525 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 ABCB4P21439 1286 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 POLR2FP61218 127 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 EXOC3L4Q17RC7 722 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 USP42Q9H9J4 1324 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 SLFN14P0C7P3 912 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 BPIFB4P59827 614 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 GABPAQ06546 454 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 METTL23Q86XA0 190 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 ENAHQ8N8S7 591 aaPredicted RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 TIGD1Q96MW7 591 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 RIC8AQ9NPQ8 531 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 HACL1Q9UJ83 578 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 WDR19Q8NEZ3 1342 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 MYL3P08590 195 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 MTMR1Q13613 665 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 HADHQ16836 314 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 PARVGQ9HBI0 331 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 FANCLQ9NW38 375 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 TTLL3Q9Y4R7 772 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 GSG1L2A8MUP6 293 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 COPB2P35606 906 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 UAP1Q16222 522 aaPredicted RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 FAM186BQ8IYM0 893 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 UBLCP1Q8WVY7 318 aaPredicted RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 AIFM3Q96NN9 605 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 DPEP1P16444 411 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 MARK3P27448 753 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 RCAN1P53805 252 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 MFAP3P55082 362 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 PTK2Q05397 1052 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 C6orf163Q5TEZ5 329 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 SCYL2Q6P3W7 929 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
PKP4-201ENST00000389757 AMFRQ9UKV5 643 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 DAGLAQ9Y4D2 1042 aa11.26□□□□□ -0.61
PKP4-201ENST00000389757 PFKFB3Q16875 520 aaPredicted RBP11.25□□□□□ -0.61
PKP4-201ENST00000389757 FAM167AQ96KS9 214 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 DISC1Q9NRI5 854 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 ARHGEF37A1IGU5 675 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 NMT2O60551 498 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 CSF1RP07333 972 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
PKP4-201ENST00000389757 KRT81Q14533 505 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 GRM4Q14833 912 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 RAB3IL1Q8TBN0 382 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 PCDHB6Q9Y5E3 794 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
PKP4-201ENST00000389757 GNAT1P11488 350 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 SCARF1Q14162 830 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 LRRC41Q15345 812 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 CYB5R4Q7L1T6 521 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 ARFGAP2Q8N6H7 521 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 P2RX5Q93086 422 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 CDC25AP30304 524 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
PKP4-201ENST00000389757 CTTNQ14247 550 aaKnown RBP11.25□□□□□ -0.61
PKP4-201ENST00000389757 FAM49AQ9H0Q0 323 aaPredicted RBP11.25□□□□□ -0.61
PKP4-201ENST00000389757 RRP9O43818 475 aaKnown RBP11.24□□□□□ -0.61
PKP4-201ENST00000389757 NSFP46459 744 aaKnown RBP11.24□□□□□ -0.61
PKP4-201ENST00000389757 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
PKP4-201ENST00000389757 DAAM2Q86T65 1068 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms