RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 DDX12PQ92771 950 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 TMX4Q9H1E5 349 aaPredicted RBP16.65■□□□□ 0.26
SCFD2-201ENST00000388940 NHEJ1Q9H9Q4 299 aaPredicted RBP16.65■□□□□ 0.26
SCFD2-201ENST00000388940 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 GUCA1BQ9UMX6 200 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 KDM3AQ9Y4C1 1321 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
SCFD2-201ENST00000388940 KRT86O43790 486 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
SCFD2-201ENST00000388940 TUBBP07437 444 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 KLK7P49862 253 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 HDLBPQ00341 1268 aaKnown RBP16.64■□□□□ 0.25
SCFD2-201ENST00000388940 NFIAQ12857 509 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 MAN2A1Q16706 1144 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 DYMQ7RTS9 669 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 SIK3Q9Y2K2 1263 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 G3V3G9 751 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 SLC16A2P36021 539 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 USP11P51784 963 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
SCFD2-201ENST00000388940 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 IDI2Q9BXS1 227 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 FUT8Q9BYC5 575 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 NDST4Q9H3R1 872 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 ZSWIM4Q9H7M6 989 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 PCDHA12Q9UN75 941 aa16.64■□□□□ 0.25
SCFD2-201ENST00000388940 CYP3A7-CYP3A51PA0A087WV96 503 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 SASH3O75995 380 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 CYP3A7P24462 503 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 ECM1Q16610 540 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 PAPD7Q5XG87 772 aaKnown RBP16.63■□□□□ 0.25
SCFD2-201ENST00000388940 MOXD1Q6UVY6 613 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 LRRC55Q6ZSA7 311 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 PCMTD1Q96MG8 357 aaPredicted RBP16.63■□□□□ 0.25
SCFD2-201ENST00000388940 MBOAT7Q96N66 472 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 KANSL2Q9H9L4 492 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 PLAGL2Q9UPG8 496 aa16.63■□□□□ 0.25
SCFD2-201ENST00000388940 ZNF646O15015 1829 aaPredicted RBP16.63■□□□□ 0.25
SCFD2-201ENST00000388940 IPO7O95373 1038 aaKnown RBP16.62■□□□□ 0.25
SCFD2-201ENST00000388940 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
SCFD2-201ENST00000388940 JAKMIP2Q96AA8 810 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 PURBQ96QR8 312 aaKnown RBP16.62■□□□□ 0.25
SCFD2-201ENST00000388940 TSG101Q99816 390 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 EDEM3Q9BZQ6 932 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 TRIM10Q9UDY6 481 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 IDEP14735 1019 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 ATP2B2Q01814 1243 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 LONRF2Q1L5Z9 754 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
SCFD2-201ENST00000388940 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
SCFD2-201ENST00000388940 MAP2K7O14733 419 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCFD2-201ENST00000388940 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
SCFD2-201ENST00000388940 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 KCNMB3Q9NPA1 279 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 ST7Q9NRC1 585 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
SCFD2-201ENST00000388940 ANO9A1A5B4 782 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 MARCH6O60337 910 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 COASYQ13057 564 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 AP3B2Q13367 1082 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
SCFD2-201ENST00000388940 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 TSGA10Q9BZW7 698 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 PCDHA1Q9Y5I3 950 aa16.61■□□□□ 0.25
SCFD2-201ENST00000388940 ERLIN1O75477 346 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 LCA5LO95447 670 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 HSPA1LP34931 641 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 SLC1A4P43007 532 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 VAV2P52735 878 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 BEND6Q5SZJ8 279 aaPredicted RBP16.6■□□□□ 0.25
SCFD2-201ENST00000388940 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 PNKPQ96T60 521 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 TMEM51Q9NW97 253 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 FAM198AQ9UFP1 575 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 SAR1BQ9Y6B6 198 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms