RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 IRF2BP1Q8IU81 584 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 MYMKA6NI61 221 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 KCNJ18B7U540 433 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 TNNT1P13805 278 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 EEF1GP26641 437 aaKnown RBP21.54■■□□□ 1.04
GMDS-201ENST00000380805 SPIRE1Q08AE8 756 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 KCNJ12Q14500 433 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 FOXR2Q6PJQ5 311 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 ANKRD20A12PQ8NF67 263 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 DEFB129Q9H1M3 183 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 ZNF541Q9H0D2 1346 aa21.54■■□□□ 1.04
GMDS-201ENST00000380805 UQCRHLA0A096LP55 91 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 KIF2AO00139 706 aaPredicted RBP21.53■■□□□ 1.04
GMDS-201ENST00000380805 ARHGAP6O43182 974 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 CCP110O43303 1012 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 STX10O60499 249 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 UQCRHP07919 91 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 CCNE1P24864 410 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 COPB1P53618 953 aaKnown RBP21.53■■□□□ 1.04
GMDS-201ENST00000380805 PMS1P54277 932 aaKnown RBP21.53■■□□□ 1.04
GMDS-201ENST00000380805 STK4Q13043 487 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 MCM6Q14566 821 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 RASA3Q14644 834 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 MIGA2Q7L4E1 593 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 FEM1BQ9UK73 627 aa21.53■■□□□ 1.04
GMDS-201ENST00000380805 SHTN1A0MZ66 631 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 BICDL2A1A5D9 508 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 ECM1Q16610 540 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 KCNK18Q7Z418 384 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 KIAA0895Q8NCT3 520 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 P2RX5Q93086 422 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 FAM20AQ96MK3 541 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 PANX2Q96RD6 677 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 MAPK8IP1Q9UQF2 711 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 STK24Q9Y6E0 443 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 DOCK1Q14185 1865 aa21.52■■□□□ 1.04
GMDS-201ENST00000380805 TRIM49BA6NDI0 452 aa21.52■■□□□ 1.03
GMDS-201ENST00000380805 TUBB4AP04350 444 aa21.52■■□□□ 1.03
GMDS-201ENST00000380805 PTPN21Q16825 1174 aa21.52■■□□□ 1.03
GMDS-201ENST00000380805 PPP1R13BQ96KQ4 1090 aa21.52■■□□□ 1.03
GMDS-201ENST00000380805 DUSP9Q99956 384 aaKnown RBP21.52■■□□□ 1.03
GMDS-201ENST00000380805 PAXBP1Q9Y5B6 917 aa21.52■■□□□ 1.03
GMDS-201ENST00000380805 RBBP6Q7Z6E9 1792 aaKnown RBP21.51■■□□□ 1.03
GMDS-201ENST00000380805 MARCH6O60337 910 aa21.51■■□□□ 1.03
GMDS-201ENST00000380805 FECHP22830 423 aa21.51■■□□□ 1.03
GMDS-201ENST00000380805 PSMD2Q13200 908 aa21.51■■□□□ 1.03
GMDS-201ENST00000380805 PTPN14Q15678 1187 aa21.51■■□□□ 1.03
GMDS-201ENST00000380805 FAM86B1E9PN63 330 aa21.5■■□□□ 1.03
GMDS-201ENST00000380805 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
GMDS-201ENST00000380805 FAM86B2P0C5J1 330 aa21.5■■□□□ 1.03
GMDS-201ENST00000380805 CENPPQ6IPU0 288 aa21.5■■□□□ 1.03
GMDS-201ENST00000380805 BAG1Q99933 345 aaPredicted RBP21.5■■□□□ 1.03
GMDS-201ENST00000380805 ABCB11O95342 1321 aa21.5■■□□□ 1.03
GMDS-201ENST00000380805 PARP14Q460N5 1801 aa21.5■■□□□ 1.03
GMDS-201ENST00000380805 AKR1B15C9JRZ8 316 aaPredicted RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 N4BP3O15049 544 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 COBLO75128 1261 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 EGFRP00533 1210 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 FCER1AP12319 257 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 CCT6AP40227 531 aaKnown RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 HAUS3Q68CZ6 603 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 GUF1Q8N442 669 aaKnown RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 LPAR1Q92633 364 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 DNAJC19Q96DA6 116 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 CCDC51Q96ER9 411 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 TRIM47Q96LD4 638 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 GLIS2Q9BZE0 524 aaPredicted RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 GJA3Q9Y6H8 435 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 TRIM14Q14142 442 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 PRR16Q569H4 304 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 CEP135Q66GS9 1140 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 KCTD17Q8N5Z5 321 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 DDX12PQ92771 950 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 GJA10Q969M2 543 aa21.49■■□□□ 1.03
GMDS-201ENST00000380805 NAA15Q9BXJ9 866 aaKnown RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 MRPL11Q9Y3B7 192 aaKnown RBP21.49■■□□□ 1.03
GMDS-201ENST00000380805 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.49■■□□□ 1.03
GMDS-201ENST00000380805 IGLV3-22A0A075B6J6 115 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 A0A1W2PQC6 194 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 LGALS16A8MUM7 142 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 MFAP3LO75121 409 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
GMDS-201ENST00000380805 TAL1P17542 331 aaPredicted RBP21.48■■□□□ 1.03
GMDS-201ENST00000380805 GMPSP49915 693 aaPredicted RBP21.48■■□□□ 1.03
GMDS-201ENST00000380805 GHRHRQ02643 423 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 GOLGA8FQ08AF8 430 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 GOLGA8DPQ0D2H9 430 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 SRRTQ9BXP5 876 aaKnown RBP21.48■■□□□ 1.03
GMDS-201ENST00000380805 KIAA1683Q9H0B3 1180 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 TRMT1Q9NXH9 659 aaKnown RBP21.48■■□□□ 1.03
GMDS-201ENST00000380805 TAB2Q9NYJ8 693 aa21.48■■□□□ 1.03
GMDS-201ENST00000380805 GCOM1H8Y6P7 765 aaPredicted RBP21.47■■□□□ 1.03
GMDS-201ENST00000380805 WDR46O15213 610 aaKnown RBP21.47■■□□□ 1.03
GMDS-201ENST00000380805 CTNND1O60716 968 aaKnown RBP21.47■■□□□ 1.03
GMDS-201ENST00000380805 GYPCP04921 128 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 POLR2MP0CAP2 368 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 HOXA13P31271 388 aaPredicted RBP21.47■■□□□ 1.03
GMDS-201ENST00000380805 ADKP55263 362 aaKnown RBP21.47■■□□□ 1.03
GMDS-201ENST00000380805 ANKRD40Q6AI12 368 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms