RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DUSP9Q99956 384 aaKnown RBP14.08□□□□□ -0.16
VPS16-202ENST00000380445 TUBGCP2Q9BSJ2 902 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 NUP58Q9BVL2 599 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 STK24Q9Y6E0 443 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 FCER1AP12319 257 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 GNG11P61952 73 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 DLGAP5Q15398 846 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 SHROOM1Q2M3G4 852 aaPredicted RBP14.08□□□□□ -0.16
VPS16-202ENST00000380445 ANKRD40Q6AI12 368 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 MEIS2O14770 477 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 VIL1P09327 827 aaKnown RBP14.07□□□□□ -0.16
VPS16-202ENST00000380445 KRT9P35527 623 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 CCDC125Q86Z20 511 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 LARGE2Q8N3Y3 721 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 GUF1Q8N442 669 aaKnown RBP14.07□□□□□ -0.16
VPS16-202ENST00000380445 RETREG2Q8NC44 543 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 ZNF507Q8TCN5 953 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 FAM151AQ8WW52 585 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 MBOAT7Q96N66 472 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 PSME4Q14997 1843 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 TBX3O15119 743 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 SF3B2Q13435 895 aaKnown RBP14.07□□□□□ -0.16
VPS16-202ENST00000380445 FOXR2Q6PJQ5 311 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 KIAA0895Q8NCT3 520 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 DDX12PQ92771 950 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 UPF1Q92900 1129 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS16-202ENST00000380445 IQCDQ96DY2 449 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 SLC39A2Q9NP94 309 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 KCNMB3Q9NPA1 279 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 LUC7L2Q9Y383 392 aaKnown RBP14.07□□□□□ -0.16
VPS16-202ENST00000380445 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
VPS16-202ENST00000380445 URI1O94763 535 aaPredicted RBP14.06□□□□□ -0.16
VPS16-202ENST00000380445 MTIF2P46199 727 aaKnown RBP14.06□□□□□ -0.16
VPS16-202ENST00000380445 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
VPS16-202ENST00000380445 LRRC63Q05C16 580 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 NAA30Q147X3 362 aaPredicted RBP14.06□□□□□ -0.16
VPS16-202ENST00000380445 RAD9BQ6WBX8 426 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 DYMQ7RTS9 669 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 OR8K1Q8NGG5 319 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 CNOT6LQ96LI5 555 aaKnown RBP14.06□□□□□ -0.16
VPS16-202ENST00000380445 NUDT12Q9BQG2 462 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 DESI2Q9BSY9 194 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 TCP10L2B9ZVM9 353 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 IDEP14735 1019 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 MMP14P50281 582 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 ARHGAP4P98171 946 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 MTF1Q14872 753 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 HAUS3Q68CZ6 603 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 GOPCQ9HD26 462 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 CAPN11Q9UMQ6 739 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 ABCB11O95342 1321 aa14.06□□□□□ -0.16
VPS16-202ENST00000380445 TBC1D8BQ0IIM8 1120 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 Q4G0T1 1027 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 FKBP15Q5T1M5 1219 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 FKBP1CQ5VVH2 108 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 ERMNQ8TAM6 284 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
VPS16-202ENST00000380445 ZNF70Q9UC06 446 aaPredicted RBP14.05□□□□□ -0.16
VPS16-202ENST00000380445 KIF5CO60282 957 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 STAT2P52630 851 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 MNS1Q8NEH6 495 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 GMLQ99445 158 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 TSG101Q99816 390 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 NOC4LQ9BVI4 516 aaKnown RBP14.05□□□□□ -0.16
VPS16-202ENST00000380445 B4DLN1 442 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 PSMD14O00487 310 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 RAD17O75943 681 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 SREBF1P36956 1147 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 USH1GQ495M9 461 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 FAM20AQ96MK3 541 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 FEZ1Q99689 392 aa14.05□□□□□ -0.16
VPS16-202ENST00000380445 TTC26A0AVF1 554 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 EHHADHQ08426 723 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 ARHGAP29Q52LW3 1261 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 CCDC65Q8IXS2 484 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 ZNF397Q8NF99 534 aaPredicted RBP14.04□□□□□ -0.16
VPS16-202ENST00000380445 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 DNAJC7Q99615 494 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 SEMA6BQ9H3T3 888 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 TMX2Q9Y320 296 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 A0A1W2PRG0 241 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 TRIM21P19474 475 aaKnown RBP14.04□□□□□ -0.16
VPS16-202ENST00000380445 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 AGBL3Q8NEM8 1001 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 SH2D4AQ9H788 454 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 MRPL44Q9H9J2 332 aaKnown RBP14.04□□□□□ -0.16
VPS16-202ENST00000380445 ZNHIT6Q9NWK9 470 aaKnown RBP14.04□□□□□ -0.16
VPS16-202ENST00000380445 PRR12Q9ULL5 1215 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 KIAA1024Q9UPX6 916 aa14.04□□□□□ -0.16
VPS16-202ENST00000380445 CLRN2A0PK11 232 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 PIK3CDO00329 1044 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms