RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 BMP2KQ9NSY1 1161 aaPredicted RBP25.83■■□□□ 1.73
VPS16-201ENST00000380443 PPP2R2CQ9Y2T4 447 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 MYMKA6NI61 221 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 SPDYE3A6NKU9 549 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 LGALS16A8MUM7 142 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 NFKBIEO00221 500 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 FGFR1OPO95684 399 aaKnown RBP25.82■■□□□ 1.72
VPS16-201ENST00000380443 SREBF1P36956 1147 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 CCT6AP40227 531 aaKnown RBP25.82■■□□□ 1.72
VPS16-201ENST00000380443 STAT2P52630 851 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 MCM6Q14566 821 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 KCTD17Q8N5Z5 321 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 CHURC1Q8WUH1 139 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 ZBED3Q96IU2 234 aaPredicted RBP25.82■■□□□ 1.72
VPS16-201ENST00000380443 VPS16Q9H269 839 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 ZBTB21Q9ULJ3 1066 aa25.82■■□□□ 1.72
VPS16-201ENST00000380443 A0A1W2PRG0 241 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 CIITAP33076 1130 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 ARHGAP4P98171 946 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 MAP3K10Q02779 954 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 RASSF7Q02833 373 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 STK4Q13043 487 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 GUF1Q8N442 669 aaKnown RBP25.81■■□□□ 1.72
VPS16-201ENST00000380443 CSGALNACT2Q8N6G5 542 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 TAB2Q9NYJ8 693 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 PRR12Q9ULL5 1215 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 CLRN2A0PK11 232 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 LMNB1P20700 586 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 DNM2P50570 870 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 GOLGA8FQ08AF8 430 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 GOLGA8DPQ0D2H9 430 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 PTPN21Q16825 1174 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 CENPPQ6IPU0 288 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 FAM20AQ96MK3 541 aa25.81■■□□□ 1.72
VPS16-201ENST00000380443 DUSP9Q99956 384 aaKnown RBP25.81■■□□□ 1.72
VPS16-201ENST00000380443 TRIM49BA6NDI0 452 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 CYP3A4P08684 503 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 HAUS3Q68CZ6 603 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 FAM160B2Q86V87 743 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 TMTC1Q8IUR5 882 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 ERMNQ8TAM6 284 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 IQCDQ96DY2 449 aa25.8■■□□□ 1.72
VPS16-201ENST00000380443 NUP88Q99567 741 aaPredicted RBP25.8■■□□□ 1.72
VPS16-201ENST00000380443 ABCB11O95342 1321 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 GYPCP04921 128 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 PMS1P54277 932 aaKnown RBP25.79■■□□□ 1.72
VPS16-201ENST00000380443 UBXN1Q04323 297 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 MB21D1Q8N884 522 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 PRKCSHP14314 528 aaPredicted RBP25.79■■□□□ 1.72
VPS16-201ENST00000380443 YY1P25490 414 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 ZNF507Q8TCN5 953 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 L2HGDHQ9H9P8 463 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 GINM1Q9NU53 330 aa25.79■■□□□ 1.72
VPS16-201ENST00000380443 CCDC175P0C221 793 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 CASP14P31944 242 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 LRRC63Q05C16 580 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 EHHADHQ08426 723 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 C9orf131Q5VYM1 1079 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 RETREG2Q8NC44 543 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 KIAA0895Q8NCT3 520 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 NUP58Q9BVL2 599 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 PDCL3Q9H2J4 239 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 VCPKMTQ9H867 229 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 RNF181Q9P0P0 153 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 COL4A5P29400 1685 aa25.78■■□□□ 1.72
VPS16-201ENST00000380443 COBLO75128 1261 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 TNIP1Q15025 636 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 ANKRD40Q6AI12 368 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 CIAPIN1Q6FI81 312 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 DDX12PQ92771 950 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 NUDT12Q9BQG2 462 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 VEZTQ9HBM0 779 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 ZBTB12Q9Y330 459 aaPredicted RBP25.77■■□□□ 1.72
VPS16-201ENST00000380443 FCER1AP12319 257 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 CAP2P40123 477 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 CXCL9Q07325 125 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 TRIM65Q6PJ69 517 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 SYT10Q6XYQ8 523 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 ETNPPLQ8TBG4 499 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 EHMT1Q9H9B1 1298 aa25.77■■□□□ 1.72
VPS16-201ENST00000380443 USH1GQ495M9 461 aa25.76■■□□□ 1.71
VPS16-201ENST00000380443 ERO1AQ96HE7 468 aa25.76■■□□□ 1.71
VPS16-201ENST00000380443 TUBGCP2Q9BSJ2 902 aa25.76■■□□□ 1.71
VPS16-201ENST00000380443 RANBP17Q9H2T7 1088 aaKnown RBP25.76■■□□□ 1.71
VPS16-201ENST00000380443 FEM1BQ9UK73 627 aa25.76■■□□□ 1.71
VPS16-201ENST00000380443 SBF1O95248 1867 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 KIF20AO95235 890 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 ASNSP08243 561 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 RPS12P25398 132 aaKnown RBP25.75■■□□□ 1.71
VPS16-201ENST00000380443 HSP90AA2PQ14568 343 aaPredicted RBP25.75■■□□□ 1.71
VPS16-201ENST00000380443 CYP26C1Q6V0L0 522 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 ABHD10Q9NUJ1 306 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 PGAP2Q9UHJ9 254 aa25.75■■□□□ 1.71
VPS16-201ENST00000380443 SLU7O95391 586 aaKnown RBP25.74■■□□□ 1.71
VPS16-201ENST00000380443 ECE1P42892 770 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 FXR1P51114 621 aaKnown RBP eCLIP25.74■■□□□ 1.71
VPS16-201ENST00000380443 CREBRFQ8IUR6 639 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 CCDC65Q8IXS2 484 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 ACER1Q8TDN7 264 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms