RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 KLK7P49862 253 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 CBX1P83916 185 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 FBXO38Q6PIJ6 1188 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 SV2BQ7L1I2 683 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 GLIS3Q8NEA6 775 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 LARP4BQ92615 738 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 CARD6Q9BX69 1037 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 NAA15Q9BXJ9 866 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PDGFDQ9GZP0 370 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 SEMA6BQ9H3T3 888 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 KANSL2Q9H9L4 492 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 GOLGA6L9A6NEM1 432 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 LGALS16A8MUM7 142 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 B4DLN1 442 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 CCNE1P24864 410 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 EEF1GP26641 437 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 CASQ1P31415 396 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 MRPL12P52815 198 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 FKBP1AP62942 108 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 HDLBPQ00341 1268 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 PDIA5Q14554 519 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 CDC37Q16543 378 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 TMEM266Q2M3C6 531 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 ZNF772Q68DY9 489 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 NYAP2Q9P242 653 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 CGNQ9P2M7 1197 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 SERPINA10Q9UK55 444 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 PCDHA1Q9Y5I3 950 aa8.9□□□□□ -0.98
PDLIM5-204ENST00000380176 RASSF10A6NK89 507 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 F5H6K3 240 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 AMPD3Q01432 767 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 ICA1Q05084 483 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 KLRC3Q07444 240 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 RAD54LQ92698 747 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 CCDC51Q96ER9 411 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 CDK5RAP3Q96JB5 506 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 TUBGCP2Q9BSJ2 902 aa8.9□□□□□ -0.99
PDLIM5-204ENST00000380176 C21orf2O43822 256 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 MAP3K9P80192 1104 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 TMEM119Q4V9L6 283 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 KRT79Q5XKE5 535 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 TRIM34Q9BYJ4 488 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 STK17AQ9UEE5 414 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 PCDHA12Q9UN75 941 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 MEIS2O14770 477 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 GH2P01242 217 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 TPM1P09493 284 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 LRRC41Q15345 812 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 ABCB5Q2M3G0 1257 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 MIIPQ5JXC2 388 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 CNNM4Q6P4Q7 775 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 DDX12PQ92771 950 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 SLF1Q9BQI6 1058 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 EPC1Q9H2F5 836 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 AGPAT5Q9NUQ2 364 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 MAGEC2Q9UBF1 373 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 A0A1W2PQC6 194 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 A0A1W2PRG0 241 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 NDUFB10O96000 172 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 IDEP14735 1019 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 ERCC3P19447 782 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 EN1Q05925 392 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 SLC15A2Q16348 729 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 USH1GQ495M9 461 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 CENPPQ6IPU0 288 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 WDR59Q6PJI9 974 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 TMEM179Q6ZVK1 233 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 UNC13DQ70J99 1090 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 TMTC1Q8IUR5 882 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 ZNF397Q8NF99 534 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 CNKSR1Q969H4 720 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 PSMD1Q99460 953 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
PDLIM5-204ENST00000380176 BICDL2A1A5D9 508 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 PPIP5K2O43314 1243 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 MARCH6O60337 910 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TADA3O75528 432 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 STAT3P40763 770 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TRIM14Q14142 442 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 ARHGAP29Q52LW3 1261 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 CYP26C1Q6V0L0 522 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 SPICE1Q8N0Z3 855 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 ANO3Q9BYT9 981 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 RAB34Q9BZG1 259 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TFR2Q9UP52 801 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 REXO2Q9Y3B8 237 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 CLRN2A0PK11 232 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TCP10L2B9ZVM9 353 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 E9PMD0 336 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 RXRBP28702 533 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 ARHGAP25P42331 645 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 DNM2P50570 870 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 EHHADHQ08426 723 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms