RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 MAPK8IP1Q9UQF2 711 aa24.1■■□□□ 1.45
TRIM54-202ENST00000380075 A0A1W2PQC6 194 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 PPP1R11O60927 126 aaPredicted RBP24.09■■□□□ 1.45
TRIM54-202ENST00000380075 CCNE1P24864 410 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 ATP2B2Q01814 1243 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 PDE4DQ08499 809 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 TTBK2Q6IQ55 1244 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 TTI2Q6NXR4 508 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 TATDN1Q6P1N9 297 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 SV2BQ7L1I2 683 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 SH3BP5LQ7L8J4 393 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 FAM114A1Q8IWE2 563 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 CDCA5Q96FF9 252 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 TRIM47Q96LD4 638 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 MYH4Q9Y623 1939 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 PVALEFA0A1B0GWK0 134 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 LGALS16A8MUM7 142 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 CASP14P31944 242 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 GLIPR1L2Q4G1C9 344 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 NBPF12Q5TAG4 269 aaPredicted RBP24.09■■□□□ 1.45
TRIM54-202ENST00000380075 IRF2BP1Q8IU81 584 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 TMTC1Q8IUR5 882 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 CDK5RAP3Q96JB5 506 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 PSTPIP2Q9H939 334 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 PPP2R3BQ9Y5P8 575 aa24.09■■□□□ 1.45
TRIM54-202ENST00000380075 COL2A1P02458 1487 aaPredicted RBP24.08■■□□□ 1.45
TRIM54-202ENST00000380075 DDTLA6NHG4 134 aaPredicted RBP24.08■■□□□ 1.45
TRIM54-202ENST00000380075 USP17L10C9JJH3 530 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 SLC37A4O43826 429 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 FSTL1Q12841 308 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 MCTP2Q6DN12 878 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 TMEM179Q6ZVK1 233 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 ZSCAN29Q8IWY8 852 aaPredicted RBP24.08■■□□□ 1.45
TRIM54-202ENST00000380075 P2RX5Q93086 422 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 SIPA1L1O43166 1804 aa24.08■■□□□ 1.45
TRIM54-202ENST00000380075 SLC26A4O43511 780 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 EDIL3O43854 480 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 TDP2O95551 362 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 GRB10Q13322 594 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 KRT79Q5XKE5 535 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 KCTD1Q719H9 257 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 ATRNL1Q5VV63 1379 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 COBLO75128 1261 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 EEF2P13639 858 aaKnown RBP24.07■■□□□ 1.44
TRIM54-202ENST00000380075 CPLX3Q8WVH0 158 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 ADGRG1Q9Y653 693 aa24.07■■□□□ 1.44
TRIM54-202ENST00000380075 TRIM49BA6NDI0 452 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 SLC1A4P43007 532 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 FXR1P51114 621 aaKnown RBP eCLIP24.06■■□□□ 1.44
TRIM54-202ENST00000380075 UBXN1Q04323 297 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 SLFN13Q68D06 897 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 UNC13DQ70J99 1090 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 LARP4BQ92615 738 aaKnown RBP24.06■■□□□ 1.44
TRIM54-202ENST00000380075 ZNF408Q9H9D4 720 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 DDX25Q9UHL0 483 aaKnown RBP24.06■■□□□ 1.44
TRIM54-202ENST00000380075 PASKQ96RG2 1323 aa24.06■■□□□ 1.44
TRIM54-202ENST00000380075 SOWAHDA6NJG2 315 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 SLC16A2P36021 539 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 PMS1P54277 932 aaKnown RBP24.05■■□□□ 1.44
TRIM54-202ENST00000380075 MB21D1Q8N884 522 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 GMCL1P1Q8NEA9 526 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 PNMA5Q96PV4 448 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 ABHD10Q9NUJ1 306 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 BLOC1S4Q9NUP1 217 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 SYNPO2Q9UMS6 1093 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 CASQ1P31415 396 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 DNM2P50570 870 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 UBE2SQ16763 222 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 TMEM119Q4V9L6 283 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 RAD9BQ6WBX8 426 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 CSGALNACT2Q8N6G5 542 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 CSRNP1Q96S65 589 aa24.05■■□□□ 1.44
TRIM54-202ENST00000380075 NUP88Q99567 741 aaPredicted RBP24.05■■□□□ 1.44
TRIM54-202ENST00000380075 GNG11P61952 73 aa24.04■■□□□ 1.44
TRIM54-202ENST00000380075 ICA1Q05084 483 aa24.04■■□□□ 1.44
TRIM54-202ENST00000380075 CYP26C1Q6V0L0 522 aa24.04■■□□□ 1.44
TRIM54-202ENST00000380075 SNX29Q8TEQ0 813 aa24.04■■□□□ 1.44
TRIM54-202ENST00000380075 RAD54LQ92698 747 aa24.04■■□□□ 1.44
TRIM54-202ENST00000380075 DUSP9Q99956 384 aaKnown RBP24.04■■□□□ 1.44
TRIM54-202ENST00000380075 SLURP2P0DP57 97 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 USP11P51784 963 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 AP3B2Q13367 1082 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 SEPT2Q15019 361 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 QRICH1Q2TAL8 776 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 MOXD1Q6UVY6 613 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 ZNF397Q8NF99 534 aaPredicted RBP24.03■■□□□ 1.44
TRIM54-202ENST00000380075 ZNF507Q8TCN5 953 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 GMCL1Q96IK5 515 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 FZD1Q9UP38 647 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 KDM3AQ9Y4C1 1321 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 CELF2O95319 508 aaKnown RBP24.03■■□□□ 1.44
TRIM54-202ENST00000380075 STK4Q13043 487 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 SUPT20HL1Q3ZLR7 823 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 CST9Q5W186 159 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 FOXR2Q6PJQ5 311 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 CREBRFQ8IUR6 639 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 FEZ1Q99689 392 aa24.03■■□□□ 1.44
TRIM54-202ENST00000380075 URI1O94763 535 aaPredicted RBP24.02■■□□□ 1.44
TRIM54-202ENST00000380075 PSMD2Q13200 908 aa24.02■■□□□ 1.44
TRIM54-202ENST00000380075 PRKG1Q13976 671 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms