RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 REXO1L1PQ8IX06 675 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 SRBD1Q8N5C6 995 aaKnown RBP8.75□□□□□ -1.01
CDKL5-202ENST00000379996 ZDHHC16Q969W1 377 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 CLIC6Q96NY7 704 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 FOXP1Q9H334 677 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-202ENST00000379996 ZNF446Q9NWS9 450 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 TLL2Q9Y6L7 1015 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 ATP2A1O14983 1001 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 FOXN1O15353 648 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 BMP3P12645 472 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 FANCCQ00597 558 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 MORC3Q14149 939 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 PFKFB3Q16875 520 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-202ENST00000379996 SLC35G1Q2M3R5 365 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 PDCL2Q8N4E4 241 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 SAMD3Q8N6K7 520 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 C2orf69Q8N8R5 385 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 DAGLBQ8NCG7 672 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 MYL10Q9BUA6 226 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 RANBP17Q9H2T7 1088 aaKnown RBP8.75□□□□□ -1.01
CDKL5-202ENST00000379996 COL11A1P12107 1806 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-202ENST00000379996 ESYT2A0FGR8 921 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 H2AFXP16104 143 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 MARCKSP29966 332 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 OAZ1P54368 228 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 SSRP1Q08945 709 aaKnown RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 TRAF1Q13077 416 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 PUS10Q3MIT2 529 aaKnown RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 GALNT17Q6IS24 598 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 LRRC47Q8N1G4 583 aaKnown RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 ACER1Q8TDN7 264 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 ZKSCAN4Q969J2 545 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 A0A087X0B3 334 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 KLRF2D3W0D1 207 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 CYTH3O43739 400 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 ECE1P42892 770 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 SYKP43405 635 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 KMT5BQ4FZB7 885 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 KIAA1755Q5JYT7 1200 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 PRAMEF18Q5VWM3 479 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 FEZ1Q99689 392 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 ZNF215Q9UL58 517 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 SCAF8Q9UPN6 1271 aaKnown RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 WNT7AO00755 349 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 CPLX1O14810 134 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 GABBR2O75899 941 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 PBX1P40424 430 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 FMR1Q06787 632 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 TPD52L1Q16890 204 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-202ENST00000379996 KIF18AQ8NI77 898 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 PHLPP2Q6ZVD8 1323 aa8.74□□□□□ -1.01
CDKL5-202ENST00000379996 TMEM232C9JQI7 657 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 TRAF5O00463 557 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 PLEKHA8P1O95397 391 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 OATP04181 439 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 SLC1A4P43007 532 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 EARS2Q5JPH6 523 aaKnown RBP8.73□□□□□ -1.01
CDKL5-202ENST00000379996 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 DRC7Q8IY82 874 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 STAG2Q8N3U4 1231 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 CHURC1Q8WUH1 139 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 WNK4Q96J92 1243 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 PHF20Q9BVI0 1012 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 MAN1B1Q9UKM7 699 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 PNMA6FA0A0J9YX94 578 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 VCAM1P19320 739 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 STAT2P52630 851 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 MYL5Q02045 173 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 CATSPERGQ6ZRH7 1159 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 FASTKD5Q7L8L6 764 aaKnown RBP8.73□□□□□ -1.01
CDKL5-202ENST00000379996 FCHSD1Q86WN1 690 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 BECN2A8MW95 431 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 CELF2O95319 508 aaKnown RBP8.73□□□□□ -1.01
CDKL5-202ENST00000379996 MTMR2Q13614 643 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 NUP133Q8WUM0 1156 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 ERO1AQ96HE7 468 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 JMJD4Q9H9V9 463 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 BARHL2Q9NY43 387 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 KCNH3Q9ULD8 1083 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 PCDHA5Q9Y5H7 936 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 SRPRBQ9Y5M8 271 aaKnown RBP8.73□□□□□ -1.01
CDKL5-202ENST00000379996 ZHX2Q9Y6X8 837 aa8.73□□□□□ -1.01
CDKL5-202ENST00000379996 VWA3AA6NCI4 1184 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 BTBD18B2RXH4 712 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 BIN1O00499 593 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 ZBTB5O15062 677 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 GTF2A2P52657 109 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 PTPN14Q15678 1187 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 SYDE2Q5VT97 1194 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 TMC6Q7Z403 805 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 ANKRD23Q86SG2 305 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 SAPCD2Q86UD0 394 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 ADGRF4Q8IZF3 695 aa8.72□□□□□ -1.01
CDKL5-202ENST00000379996 CCDC112Q8NEF3 446 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms