RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 FAM13AO94988 1023 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 PRDX5P30044 214 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 SEPT7Q16181 437 aaKnown RBP12.52□□□□□ -0.4
SMAD9-202ENST00000379826 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 RETREG2Q8NC44 543 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 TMEM260Q9NX78 707 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 PIM2Q9P1W9 311 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 STIM2Q9P246 746 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 CETN3O15182 167 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.4
SMAD9-202ENST00000379826 NEFHP12036 1026 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.4
SMAD9-202ENST00000379826 RPS8P62241 208 aaKnown RBP12.52□□□□□ -0.4
SMAD9-202ENST00000379826 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 ADGRA1Q86SQ6 560 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 SLC44A5Q8NCS7 719 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 NKX2-3Q8TAU0 364 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 HOOK2Q96ED9 719 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 HSD3B7Q9H2F3 369 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 DDX25Q9UHL0 483 aaKnown RBP12.52□□□□□ -0.4
SMAD9-202ENST00000379826 KIF4AO95239 1232 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 HLA-DOAP06340 250 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
SMAD9-202ENST00000379826 MAN2A1Q16706 1144 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 KRT71Q3SY84 523 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 FBXL16Q8N461 479 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 SMIM22K7EJ46 135 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 UBE2SQ16763 222 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
SMAD9-202ENST00000379826 HERVK_113P62684 666 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 USH1GQ495M9 461 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 EFCC1Q9HA90 598 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 KCNK9Q9NPC2 374 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 POTEMA6NI47 508 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 GJC1P36383 396 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 ADAM9Q13443 819 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 LRRC45Q96CN5 670 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 TAOK3Q9H2K8 898 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 PICK1Q9NRD5 415 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 GCNT3O95395 438 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 BTDP43251 543 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 SMIM5Q71RC9 77 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 TMEM139Q8IV31 216 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-202ENST00000379826 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-202ENST00000379826 ATP8A2Q9NTI2 1148 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 MAEAQ7L5Y9 396 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 ADSSL1Q8N142 457 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
SMAD9-202ENST00000379826 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 TNS3Q68CZ2 1445 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-202ENST00000379826 PSD3Q9NYI0 1048 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
SMAD9-202ENST00000379826 CALUO43852 315 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 MAP2K2P36507 400 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 PLAAQ9Y263 795 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 AFDNP55196 1824 aaKnown RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 PSMD14O00487 310 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 LAD1O00515 517 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 PMS1P54277 932 aaKnown RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 FOXP2O15409 715 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 NR1D1P20393 614 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 CDKAL1Q5VV42 579 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 ZNF512BQ96KM6 892 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 PCP11498 1178 aaKnown RBP12.5□□□□□ -0.41
SMAD9-202ENST00000379826 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 NT5DC1Q5TFE4 455 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 FBXW10Q5XX13 1052 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 ICE2Q659A1 982 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 TRAPPC11Q7Z392 1133 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 ZBTB21Q9ULJ3 1066 aa12.5□□□□□ -0.41
SMAD9-202ENST00000379826 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 EZRP15311 586 aaKnown RBP12.49□□□□□ -0.41
SMAD9-202ENST00000379826 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 SLC16A2P36021 539 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 SIK1P57059 783 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 PPP1R7Q15435 360 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms