RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 PRDM5Q9NQX1 630 aaPredicted RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 WDR64B1ANS9 1081 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 LAD1O00515 517 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 MECOMQ03112 1051 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF827Q17R98 1081 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 VSIG1Q86XK7 387 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 RFX6Q8HWS3 928 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
LINC00654-201ENST00000379053 USP28Q96RU2 1077 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 FBXO40Q9UH90 709 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 INPP5FQ9Y2H2 1132 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ZMYM1Q5SVZ6 1142 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 CAPN12Q6ZSI9 719 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 GDAP1Q8TB36 358 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF148Q9UQR1 794 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 FNDC3AQ9Y2H6 1198 aaKnown RBP11.91□□□□□ -0.5
LINC00654-201ENST00000379053 PZPP20742 1482 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 MEIS1O00470 390 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ECE2O60344 883 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 H2AFZP0C0S5 128 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ABCD1P33897 745 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 CRKP46108 304 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
LINC00654-201ENST00000379053 TMEM179Q6ZVK1 233 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 H2AFVQ71UI9 128 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 MYLK4Q86YV6 388 aaPredicted RBP11.91□□□□□ -0.5
LINC00654-201ENST00000379053 APOBEC3FQ8IUX4 373 aaKnown RBP11.91□□□□□ -0.5
LINC00654-201ENST00000379053 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 PCIF1Q9H4Z3 704 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ANGPTL3Q9Y5C1 460 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 DPYSL4O14531 572 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 NR2F2P24468 414 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 KCNJ6P48051 423 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 NXNQ6DKJ4 435 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 ARMCX2Q7L311 632 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 CCNYQ8ND76 341 aa11.91□□□□□ -0.5
LINC00654-201ENST00000379053 GOLGA8SH3BPF8 625 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 ADD2P35612 726 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF157P51786 506 aaPredicted RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 ELMOD1Q8N336 334 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 IGSF1Q8N6C5 1336 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 MYO1FO00160 1098 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 PSMC2P35998 433 aaKnown RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 TTBK2Q6IQ55 1244 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 PI16Q6UXB8 463 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 MAGEF1Q9HAY2 307 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 KRIT1O00522 736 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 EPHB1P54762 984 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 SNAP25P60880 206 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 CCDC51Q96ER9 411 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 TMEM206Q9H813 350 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 ADRA2BP18089 450 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 ADKP55263 362 aaKnown RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 HDAC11Q96DB2 347 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 TTC1Q99614 292 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 CARD6Q9BX69 1037 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 RASSF4Q9H2L5 321 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 TDRD3Q9H7E2 651 aaKnown RBP11.9□□□□□ -0.5
LINC00654-201ENST00000379053 PLCB1Q9NQ66 1216 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 MAPKBP1O60336 1514 aa11.9□□□□□ -0.5
LINC00654-201ENST00000379053 DENND3A2RUS2 1198 aa11.9□□□□□ -0.51
LINC00654-201ENST00000379053 BUB1O43683 1085 aa11.9□□□□□ -0.51
LINC00654-201ENST00000379053 SMAP1Q8IYB5 467 aaPredicted RBP11.9□□□□□ -0.51
LINC00654-201ENST00000379053 FAM186BQ8IYM0 893 aa11.9□□□□□ -0.51
LINC00654-201ENST00000379053 ARHGEF2Q92974 986 aaKnown RBP11.9□□□□□ -0.51
LINC00654-201ENST00000379053 OTUD5Q96G74 571 aa11.9□□□□□ -0.51
LINC00654-201ENST00000379053 ANTXR1Q9H6X2 564 aa11.9□□□□□ -0.51
LINC00654-201ENST00000379053 CDK8P49336 464 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 KRT71Q3SY84 523 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00654-201ENST00000379053 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 DISP1Q96F81 1524 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 GADD45BO75293 160 aaPredicted RBP11.89□□□□□ -0.51
LINC00654-201ENST00000379053 ARL4AP40617 200 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 TRAPPC10P48553 1259 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 TMTC4Q5T4D3 741 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 CDKL2Q92772 493 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 UBE2SQ16763 222 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 MCUQ8NE86 351 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 CCDC85CA6NKD9 419 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 USP17L5A8MUK1 530 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms