RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 PBKQ96KB5 322 aa12.16□□□□□ -0.46
RAD50-201ENST00000378823 SCHIP1Q9P0W5 487 aaPredicted RBP12.16□□□□□ -0.46
RAD50-201ENST00000378823 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
RAD50-201ENST00000378823 ABCC10Q5T3U5 1492 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 IL13P35225 146 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 KPNA2P52292 529 aaKnown RBP12.15□□□□□ -0.46
RAD50-201ENST00000378823 BBS5Q8N3I7 341 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.15□□□□□ -0.46
RAD50-201ENST00000378823 SYNJ2BP-COX16A0A087WUM0 186 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 TCIRG1Q13488 830 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
RAD50-201ENST00000378823 COX16Q9P0S2 106 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 MTMR6Q9Y217 621 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 CLIC4Q9Y696 253 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 DTNBO60941 627 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 LRRN2O75325 713 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 CXCR5P32302 372 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 PSMC2P35998 433 aaKnown RBP12.15□□□□□ -0.46
RAD50-201ENST00000378823 FAM47CQ5HY64 1035 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 KLHL29Q96CT2 875 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 CLIC6Q96NY7 704 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 NVLO15381 856 aaKnown RBP12.15□□□□□ -0.46
RAD50-201ENST00000378823 ALS2CLQ60I27 953 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 RFX6Q8HWS3 928 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 RNF14Q9UBS8 474 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 STK17AQ9UEE5 414 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 ANGPTL2Q9UKU9 493 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 CCDC151A5D8V7 595 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 SCRN1Q12765 414 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.469e-6■■□□□ 14.5
RAD50-201ENST00000378823 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.15□□□□□ -0.46
RAD50-201ENST00000378823 GSTA4O15217 222 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 DMTNQ08495 405 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 SNX1Q13596 522 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 KLC3Q6P597 504 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 KCTD6Q8NC69 237 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
RAD50-201ENST00000378823 MRPL47Q9HD33 250 aaKnown RBP12.15□□□□□ -0.46
RAD50-201ENST00000378823 SHROOM2Q13796 1616 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 ASXL2Q76L83 1435 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 KIAA0232Q92628 1395 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 ABCC12Q96J65 1359 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 TNKSO95271 1327 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 BTBD18B2RXH4 712 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 PPP6R2O75170 966 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 ZC3H15Q8WU90 426 aaKnown RBP12.15□□□□□ -0.47
RAD50-201ENST00000378823 TBK1Q9UHD2 729 aa12.15□□□□□ -0.47
RAD50-201ENST00000378823 HEXIM1O94992 359 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 NT5C1BQ96P26 610 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 CYP4F22Q6NT55 531 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 PGBD1Q96JS3 809 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 MYL1P05976 194 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 SLC12A1Q13621 1099 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 TMED2Q15363 201 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 ZNF449Q6P9G9 518 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 CPSF3Q9UKF6 684 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 ATP10BO94823 1461 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 ALAS1P13196 640 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 EEF1DP29692 281 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 MYOM2P54296 1465 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 TAB3Q8N5C8 712 aaPredicted RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 ZMYND10O75800 440 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 PLTPP55058 493 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 PCGF5Q86SE9 256 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 MCUQ8NE86 351 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 ZNF653Q96CK0 615 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
RAD50-201ENST00000378823 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
RAD50-201ENST00000378823 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 ZNF233A6NK53 670 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 MAPK13O15264 365 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 TRPA1O75762 1119 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 EIF3BP55884 814 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 GTF2IP78347 998 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 POLA2Q14181 598 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 PLA2G4DQ86XP0 818 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 SYNMO15061 1565 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 MED7O43513 233 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 ECEL1O95672 775 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 AFPP02771 609 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 PTH1RQ03431 593 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 TMED1Q13445 227 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 DCAF15Q66K64 600 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 RSRC2Q7L4I2 434 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 ZBTB38Q8NAP3 1195 aaPredicted RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 TTC25Q96NG3 672 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 POLR3CQ9BUI4 534 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms