RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PDXDC1Q6P996 788 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CACNA2D3Q8IZS8 1091 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 ANKRD27Q96NW4 1050 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 RIC8AQ9NPQ8 531 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 A0A0G2JS52 829 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 CFAP73A6NFT4 308 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 PPP1R12AO14974 1030 aaPredicted RBP9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SLC26A4O43511 780 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 MOCS3O95396 460 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SERPING1P05155 500 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SEPT2Q15019 361 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 IL17AQ16552 155 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SLC9C1Q4G0N8 1177 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 MAB21L3Q8N8X9 362 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
PTPRR-203ENST00000378778 HDAC7Q8WUI4 952 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 GDAP1L1Q96MZ0 367 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 RBM12Q9NTZ6 932 aaKnown RBP9.05□□□□□ -0.96
PTPRR-203ENST00000378778 TCP11L1Q9NUJ3 509 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 MYH10P35580 1976 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 NHSL1Q5SYE7 1610 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SHANK3Q9BYB0 1731 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 TRIM49BA6NDI0 452 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 STARD3NLO95772 234 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 GNA14O95837 355 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 IRX1P78414 480 aaPredicted RBP9.05□□□□□ -0.96
PTPRR-203ENST00000378778 ANKRD20A8PQ5CZ79 823 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 MEI1Q5TIA1 1274 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 NFRKBQ6P4R8 1299 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 CYB5D1Q6P9G0 228 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 PIK3AP1Q6ZUJ8 805 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 CACNA2D4Q7Z3S7 1137 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 FUKQ8N0W3 1084 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 LCORLQ8N3X6 602 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 GUF1Q8N442 669 aaKnown RBP9.05□□□□□ -0.96
PTPRR-203ENST00000378778 ACTRT1Q8TDG2 376 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 ZBTB9Q96C00 473 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 LZTS2Q9BRK4 669 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 EHD4Q9H223 541 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 NDST4Q9H3R1 872 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SLITRK6Q9H5Y7 841 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 EPB41L5Q9HCM4 733 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 CEP72Q9P209 647 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 SLC12A6Q9UHW9 1150 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 NUP98P52948 1817 aa9.05□□□□□ -0.96
PTPRR-203ENST00000378778 E7EVH7 732 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 MGRN1O60291 552 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 MCM7P33993 719 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 PPP2R2AP63151 447 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 IFT88Q13099 833 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 RASGRF1Q13972 1273 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 ITIH4Q14624 930 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 ZKSCAN8Q15776 578 aaPredicted RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 EZH2Q15910 746 aaKnown RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 GKAP1Q5VSY0 366 aaPredicted RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 C2CD5Q86YS7 1000 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 ANKS1AQ92625 1134 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 TAF4BQ92750 862 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 INPP4AQ96PE3 977 aaPredicted RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 TRIM9Q9C026 710 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 GREM2Q9H772 168 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 NFU1Q9UMS0 254 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 PLAAQ9Y263 795 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 KIAA1551Q9HCM1 1747 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 A0A1B0GUL6 1792 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 MAGEB6P1A0A0J9YX57 407 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 IRS4O14654 1257 aaPredicted RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 PMS1P54277 932 aaKnown RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 CYP27A1Q02318 531 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 GUCY2DQ02846 1103 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 MKRN3Q13064 507 aaKnown RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 ANKRD40Q6AI12 368 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 USP38Q8NB14 1042 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 BAP1Q92560 729 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 STAMQ92783 540 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 TATDN2Q93075 761 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 ORAI2Q96SN7 254 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 TSG101Q99816 390 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 FAM114A2Q9NRY5 505 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 DIS3Q9Y2L1 958 aaKnown RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 BZW2Q9Y6E2 419 aaKnown RBP9.04□□□□□ -0.96
PTPRR-203ENST00000378778 DUSP10Q9Y6W6 482 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 MAST2Q6P0Q8 1798 aa9.04□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC194A0A1B0GVG4 234 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 M0R2N6 131 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 ASAP2O43150 1006 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 GLI1P08151 1106 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 GBP1P32455 592 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 CARSP49589 748 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms