RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 KCNK18Q7Z418 384 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 COL20A1Q9P218 1284 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 STK17AQ9UEE5 414 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 RBBP6Q7Z6E9 1792 aaKnown RBP19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 PTPRFP10586 1907 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 STAT3P40763 770 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 UBXN2AP68543 259 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 ZNF658Q5TYW1 1059 aaPredicted RBP19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 FAM43AQ8N2R8 423 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 C7orf25Q9BPX7 421 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 TRIM9Q9C026 710 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 RMND1Q9NWS8 449 aa19.5■□□□□ 0.71
THUMPD2-201ENST00000378727 ZBED4O75132 1171 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 ZNF76P36508 570 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 KCNB1Q14721 858 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 KMT5BQ4FZB7 885 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 HYIQ5T013 277 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 CDK5RAP3Q96JB5 506 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 FAM20AQ96MK3 541 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 HOMER2Q9NSB8 354 aa19.49■□□□□ 0.71
THUMPD2-201ENST00000378727 FDX1P10109 184 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 MCM6Q14566 821 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 REPS2Q8NFH8 660 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 RAD54LQ92698 747 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 IFNKQ9P0W0 207 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 NRBP1Q9UHY1 535 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 ADAMTS5Q9UNA0 930 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 ZKSCAN5Q9Y2L8 839 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 GDAQ9Y2T3 454 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 NFE2L3Q9Y4A8 694 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 GLTPD2A6NH11 291 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 FANCCQ00597 558 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 DHX8Q14562 1220 aaKnown RBP19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 SH3D19Q5HYK7 790 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 KLHL10Q6JEL2 608 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 LARP4BQ92615 738 aaKnown RBP19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 ZNF830Q96NB3 372 aaPredicted RBP19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 XPO4Q9C0E2 1151 aaKnown RBP19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 EHMT1Q9H9B1 1298 aa19.48■□□□□ 0.71
THUMPD2-201ENST00000378727 PPP1R12BO60237 982 aaPredicted RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 RHOBTB3O94955 611 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 ZNF18P17022 549 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 DSG3P32926 999 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 CCT6AP40227 531 aaKnown RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 CATSPERGQ6ZRH7 1159 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 SV2BQ7L1I2 683 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 MCF2L2Q86YR7 1114 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 DRC7Q8IY82 874 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 ZC3H15Q8WU90 426 aaKnown RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 CDCA5Q96FF9 252 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 TMOD4Q9NZQ9 345 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 VAV3Q9UKW4 847 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 RPTORQ8N122 1335 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 ZC3H4Q9UPT8 1303 aaKnown RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 STX17P56962 302 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 ZFP91Q96JP5 570 aaPredicted RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 RIPK3Q9Y572 518 aa19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 CTDP1Q9Y5B0 961 aaPredicted RBP19.47■□□□□ 0.71
THUMPD2-201ENST00000378727 SCN4AP35499 1836 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 MYMKA6NI61 221 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 GOLGA6L6A8MZA4 724 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 AMPD3Q01432 767 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 COG2Q14746 738 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 PNMA2Q9UL42 364 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 CSADQ9Y600 493 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 SYNRGQ9UMZ2 1314 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 KDM3AQ9Y4C1 1321 aa19.46■□□□□ 0.71
THUMPD2-201ENST00000378727 POTECB2RU33 542 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 MED24O75448 989 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 PRCPP42785 496 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 CCDC144BQ3MJ40 725 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 CEP55Q53EZ4 464 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 HSP90AA4PQ58FG1 418 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 RBM46Q8TBY0 533 aaKnown RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 SYTL5Q8TDW5 730 aaPredicted RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 TRERF1Q96PN7 1200 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 SAMSN1Q9NSI8 373 aaKnown RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 CTNND2Q9UQB3 1225 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 POTEB3A0JP26 581 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 SLC26A4O43511 780 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 PTGS1P23219 599 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 RPS6P62753 249 aaKnown RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 ASIC1P78348 528 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 SEMA3FQ13275 785 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 SPATA1Q5VX52 437 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 NCAPH2Q6IBW4 605 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 POTEBQ6S5H4 581 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 MOB2Q70IA6 237 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 CCDC186Q7Z3E2 898 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 NT5C3AQ9H0P0 336 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 KCNF1Q9H3M0 494 aa19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 TAF1DQ9H5J8 278 aaPredicted RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 ZNF214Q9UL59 606 aaPredicted RBP19.45■□□□□ 0.7
THUMPD2-201ENST00000378727 MEIS1O00470 390 aa19.44■□□□□ 0.7
THUMPD2-201ENST00000378727 IREB2P48200 963 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms