RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 TDHQ8IZJ6 230 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 GPKOWQ92917 476 aaPredicted RBP eCLIP17.77■□□□□ 0.44
RAB4B-202ENST00000378307 DDX41Q9UJV9 622 aaKnown RBP17.77■□□□□ 0.44
RAB4B-202ENST00000378307 CNTNAP5Q8WYK1 1306 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 A6NJR5 290 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 CD4P01730 458 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 MYL3P08590 195 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 RPS6KB1P23443 525 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 ARHGAP1Q07960 439 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 RTN1Q16799 776 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 BLOC1S2Q6QNY1 142 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 SYNE3Q6ZMZ3 975 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 BRF1Q92994 677 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 LRCH3Q96II8 777 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 LBHD1Q9BQE6 289 aaPredicted RBP17.76■□□□□ 0.43
RAB4B-202ENST00000378307 SEC63Q9UGP8 760 aaKnown RBP17.76■□□□□ 0.43
RAB4B-202ENST00000378307 TBX21Q9UL17 535 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 SCN10AQ9Y5Y9 1956 aa17.76■□□□□ 0.43
RAB4B-202ENST00000378307 GOLGA8AA7E2F4 631 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 GOLGA8BA8MQT2 603 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 ZEB2O60315 1214 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 CABYRO75952 493 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
RAB4B-202ENST00000378307 CPT1AP50416 773 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 EPHB4P54760 987 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 MRPS9P82933 396 aaKnown RBP17.75■□□□□ 0.43
RAB4B-202ENST00000378307 SP2Q02086 613 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 TYW1BQ6NUM6 668 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 AFG1LQ8WV93 481 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 AGXT2Q9BYV1 514 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 TRPV6Q9H1D0 765 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 BCAS3Q9H6U6 928 aa17.75■□□□□ 0.43
RAB4B-202ENST00000378307 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
RAB4B-202ENST00000378307 FRMPD4Q14CM0 1322 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 DOCK5Q9H7D0 1870 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 PIK3CDO00329 1044 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 SORBS3O60504 671 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 RAG1P15918 1043 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
RAB4B-202ENST00000378307 C9orf50Q5SZB4 431 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
RAB4B-202ENST00000378307 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
RAB4B-202ENST00000378307 V9GY48 417 aaPredicted RBP17.74■□□□□ 0.43
RAB4B-202ENST00000378307 MROH7Q68CQ1 1323 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
RAB4B-202ENST00000378307 B4GALT4O60513 344 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 GH1P01241 217 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 MMP3P08254 477 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 CCND2P30279 289 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 FGD1P98174 961 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 SHHQ15465 462 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 UBE2SQ16763 222 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 FBXL16Q8N461 479 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 SMARCC2Q8TAQ2 1214 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 MTG1Q9BT17 334 aaPredicted RBP17.73■□□□□ 0.43
RAB4B-202ENST00000378307 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 RTEL1Q9NZ71 1219 aa17.73■□□□□ 0.43
RAB4B-202ENST00000378307 UMODL1Q5DID0 1318 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 TIMP1P01033 207 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 SEMA3FQ13275 785 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 TOB2Q14106 344 aaPredicted RBP17.72■□□□□ 0.43
RAB4B-202ENST00000378307 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 LRIT3Q3SXY7 679 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 KAT2BQ92831 832 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 PPP1R12CQ9BZL4 782 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 PSTPIP2Q9H939 334 aa17.72■□□□□ 0.43
RAB4B-202ENST00000378307 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
RAB4B-202ENST00000378307 PSMA5P28066 241 aa17.71■□□□□ 0.43
RAB4B-202ENST00000378307 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
RAB4B-202ENST00000378307 RCAN1P53805 252 aa17.71■□□□□ 0.43
RAB4B-202ENST00000378307 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
RAB4B-202ENST00000378307 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
RAB4B-202ENST00000378307 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
RAB4B-202ENST00000378307 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.43
RAB4B-202ENST00000378307 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
RAB4B-202ENST00000378307 TELO2Q9Y4R8 837 aa17.71■□□□□ 0.43
RAB4B-202ENST00000378307 STXBP3O00186 592 aa17.7■□□□□ 0.42
RAB4B-202ENST00000378307 ADAMTS3O15072 1205 aa17.7■□□□□ 0.42
RAB4B-202ENST00000378307 TLR3O15455 904 aaKnown RBP17.7■□□□□ 0.42
RAB4B-202ENST00000378307 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
RAB4B-202ENST00000378307 CYP2C18P33260 490 aa17.7■□□□□ 0.42
RAB4B-202ENST00000378307 CELF3Q5SZQ8 465 aaKnown RBP17.7■□□□□ 0.42
RAB4B-202ENST00000378307 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
RAB4B-202ENST00000378307 CUL5Q93034 780 aa17.7■□□□□ 0.42
RAB4B-202ENST00000378307 EMID1Q96A84 441 aaPredicted RBP17.7■□□□□ 0.42
RAB4B-202ENST00000378307 INPP4AQ96PE3 977 aaPredicted RBP17.7■□□□□ 0.42
RAB4B-202ENST00000378307 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
RAB4B-202ENST00000378307 NID2Q14112 1375 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 RBAK-RBAKDNI3L0D1 243 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 KPNA6O60684 536 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 GGPS1O95749 300 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
RAB4B-202ENST00000378307 EVCP57679 992 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 LAMC2Q13753 1193 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 NTRK3Q16288 839 aa17.69■□□□□ 0.42
RAB4B-202ENST00000378307 HSDL1Q3SXM5 330 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms