RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PCDHA13Q9Y5I0 950 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 DUSP10Q9Y6W6 482 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 LTBP1Q14766 1721 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 ARFGEF1Q9Y6D6 1849 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 LRRC37AA6NMS7 1700 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 MACROD2A1Z1Q3 448 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 LRRIQ3A6PVS8 624 aaPredicted RBP20.19■□□□□ 0.82
TDP2-202ENST00000378198 AKR1B1P15121 316 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 CCDC96Q2M329 555 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 FAM182BQ5T319 152 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 C2CD5Q86YS7 1000 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
TDP2-202ENST00000378198 PROM2Q8N271 834 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 DDX12PQ92771 950 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 IFIH1Q9BYX4 1025 aaKnown RBP20.19■□□□□ 0.82
TDP2-202ENST00000378198 MMRN2Q9H8L6 949 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
TDP2-202ENST00000378198 TTLL1O95922 423 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 SERPINB2P05120 415 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 PLEKP08567 350 aaPredicted RBP20.18■□□□□ 0.82
TDP2-202ENST00000378198 PRLRP16471 622 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 KIF11P52732 1056 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 ZNF543Q08ER8 600 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 CCDC102AQ96A19 550 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 SH2D4AQ9H788 454 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 GPCPD1Q9NPB8 672 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 FAM207AQ9NSI2 230 aaPredicted RBP20.18■□□□□ 0.82
TDP2-202ENST00000378198 MYH10P35580 1976 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 MYO3BQ8WXR4 1341 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 TOM1O60784 492 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 N4BP1O75113 896 aaKnown RBP20.18■□□□□ 0.82
TDP2-202ENST00000378198 TNNI2P48788 182 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 LMAN1P49257 510 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 CLK2P49760 499 aaKnown RBP20.18■□□□□ 0.82
TDP2-202ENST00000378198 DPP8Q6V1X1 898 aaPredicted RBP20.18■□□□□ 0.82
TDP2-202ENST00000378198 LRRC55Q6ZSA7 311 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 NUDT12Q9BQG2 462 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 DEF6Q9H4E7 631 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 JMJD4Q9H9V9 463 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 SWAP70Q9UH65 585 aa20.18■□□□□ 0.82
TDP2-202ENST00000378198 HOXA10P31260 410 aaPredicted RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 EIF4A3P38919 411 aaKnown RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 PICALMQ13492 652 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 ADGRF4Q8IZF3 695 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 CUL5Q93034 780 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 NAP1L4Q99733 375 aaKnown RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 SNX12Q9UMY4 172 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 FAN1Q9Y2M0 1017 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 SUGT1Q9Y2Z0 365 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 ATAD5Q96QE3 1844 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 GREB1LQ9C091 1923 aaPredicted RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 C6orf229H3BNL8 230 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 EPHB6O15197 1021 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 AKR1B10O60218 316 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 MRPL12P52815 198 aaKnown RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 CCDC70Q6NSX1 233 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 MYOCDQ8IZQ8 938 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 GOLGA5Q8TBA6 731 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 CRAMP1Q96RY5 1269 aa20.17■□□□□ 0.82
TDP2-202ENST00000378198 RNF216Q9NWF9 866 aaPredicted RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 DDX25Q9UHL0 483 aaKnown RBP20.17■□□□□ 0.82
TDP2-202ENST00000378198 LRRC53A6NM62 1247 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 ZNF185O15231 689 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
TDP2-202ENST00000378198 GTF2IP78347 998 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 ITIH3Q06033 890 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 RRAGAQ7L523 313 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 KCNK18Q7Z418 384 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 NT5C3AQ9H0P0 336 aa20.16■□□□□ 0.82
TDP2-202ENST00000378198 PDE2AO00408 941 aaPredicted RBP20.15■□□□□ 0.82
TDP2-202ENST00000378198 GYS1P13807 737 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
TDP2-202ENST00000378198 ZSCAN26Q16670 478 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 HYIQ5T013 277 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 GPATCH4Q5T3I0 446 aaKnown RBP20.15■□□□□ 0.82
TDP2-202ENST00000378198 ZNF572Q7Z3I7 529 aaPredicted RBP20.15■□□□□ 0.82
TDP2-202ENST00000378198 MMGT1Q8N4V1 131 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 BAP1Q92560 729 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 DNAJC19Q96DA6 116 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 ALS2CR12Q96Q35 445 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 BMP2KQ9NSY1 1161 aaPredicted RBP20.15■□□□□ 0.82
TDP2-202ENST00000378198 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 KDM3AQ9Y4C1 1321 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 PJA2O43164 708 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 MARCH6O60337 910 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 FKBP3Q00688 224 aaKnown RBP20.15■□□□□ 0.82
TDP2-202ENST00000378198 COASYQ13057 564 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 UBE2SQ16763 222 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 PDXDC1Q6P996 788 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 HAS1Q92839 578 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 USP21Q9UK80 565 aa20.15■□□□□ 0.82
TDP2-202ENST00000378198 SSU72P8A0A1W2PR75 194 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 PPP1R11O60927 126 aaPredicted RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 ACTN2P35609 894 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms