RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 GSCP56915 257 aaPredicted RBP18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 KRT25Q7Z3Z0 450 aa18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 CREG2Q8IUH2 290 aa18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 ROBO3Q96MS0 1386 aa18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 ZNF831Q5JPB2 1677 aa18.4■□□□□ 0.54
PCDHA1-201ENST00000378133 NDUFAB1O14561 156 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 NFIXQ14938 502 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 NEK8Q86SG6 692 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 TBCKQ8TEA7 893 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 EYA3Q99504 573 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 MMTAG2Q9BU76 263 aaKnown RBP18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 MAGEF1Q9HAY2 307 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 SLC39A2Q9NP94 309 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 BIN2Q9UBW5 565 aaPredicted RBP18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 RPS6KA4O75676 772 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 PPP4CP60510 307 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 GSTO1P78417 241 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 MRPS25P82663 173 aaKnown RBP18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 SLC7A5Q01650 507 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 B4GALNT4Q76KP1 1039 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 KIAA0895Q8NCT3 520 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 ARL8AQ96BM9 186 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 SNX12Q9UMY4 172 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 CAPN7Q9Y6W3 813 aa18.39■□□□□ 0.53
PCDHA1-201ENST00000378133 A6NNZ2 444 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 CCDC172P0C7W6 258 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 GNA11P29992 359 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 TXKP42681 527 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 CDK8P49336 464 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 NT5C2P49902 561 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 TUBB8Q3ZCM7 444 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 FAM114A1Q8IWE2 563 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 PURBQ96QR8 312 aaKnown RBP18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 SEMA6BQ9H3T3 888 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 MYH1P12882 1939 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 HSF2BPO75031 334 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 PLEKP08567 350 aaPredicted RBP18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 AMPD3Q01432 767 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 ALS2CLQ60I27 953 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 SPATA4Q8NEY3 305 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 PIGSQ96S52 555 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
PCDHA1-201ENST00000378133 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 MAP2K2P36507 400 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 SKOR1P84550 965 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 PDCLQ13371 301 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 TTMPQ5BVD1 217 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 MAST2Q6P0Q8 1798 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 H0YHG0 523 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 VAV2P52735 878 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 EPHB4P54760 987 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 ZSCAN29Q8IWY8 852 aaPredicted RBP18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 OTUD6BQ8N6M0 293 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 TSEN2Q8NCE0 465 aaKnown RBP18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 TRIM58Q8NG06 486 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 RUBCNQ92622 972 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 CCDC42Q96M95 316 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 LRWD1Q9UFC0 647 aa18.37■□□□□ 0.53
PCDHA1-201ENST00000378133 ZNF263O14978 683 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 LDHCP07864 332 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 SPA17Q15506 151 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 FKBP15Q5T1M5 1219 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 CNNM4Q6P4Q7 775 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 CALML4Q96GE6 196 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 ERGIC2Q96RQ1 377 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 RTFDC1Q9BY42 306 aaPredicted RBP18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 TSGA10Q9BZW7 698 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 CXorf56Q9H5V9 222 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 SEC63Q9UGP8 760 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 TACC1O75410 805 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 BTDP43251 543 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 ITIH3Q06033 890 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 EMBQ6PCB8 327 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 ZNF287Q9HBT7 754 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 RGL2O15211 777 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 SV2BQ7L1I2 683 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 DYMQ7RTS9 669 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 EP400Q96L91 3159 aa18.36■□□□□ 0.53
PCDHA1-201ENST00000378133 ZEB2O60315 1214 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms