RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 LRRC43Q8N309 656 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 MYBP10242 640 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 XPAP23025 273 aaPredicted RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 SNX1Q13596 522 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 RNF217Q8TC41 542 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 PASKQ96RG2 1323 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 GABPB2Q8TAK5 448 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 RMDN2Q96LZ7 410 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 BCAP29Q9UHQ4 241 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 UBXN2AP68543 259 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 RNF168Q8IYW5 571 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 KLRF2D3W0D1 207 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 IKBKBO14920 756 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 SUN1O94901 812 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 SLC12A2P55011 1212 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 SLC7A5Q01650 507 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 FAM117BQ6P1L5 589 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 PUS3Q9BZE2 481 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 HEXIM1O94992 359 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 ELF1P32519 619 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 GNPTABQ3T906 1256 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 DEPTORQ8TB45 409 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 GCNAQ96QF7 691 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 MAP10Q9P2G4 905 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 A0A087WUV0 522 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 DLATP10515 647 aaKnown RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 LIG4P49917 911 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 MESDQ14696 234 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 LRRC41Q15345 812 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 TMTC4Q5T4D3 741 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 TCP11Q8WWU5 503 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 SYNDIG1LA6NDD5 238 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 NNTQ13423 1086 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 EXOC3L4Q17RC7 722 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 ZNF658Q5TYW1 1059 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 Q9H521 79 aa13.04□□□□□ -0.32
PCDHA9-201ENST00000378122 ADRA2BP18089 450 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 RASIP1Q5U651 963 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 PPM1KQ8N3J5 372 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 N4BP1O75113 896 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 FTCDO95954 541 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 PIK3CAP42336 1068 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 ZMYM1Q5SVZ6 1142 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 ELMSAN1Q6PJG2 1045 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 KRT26Q7Z3Y9 468 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 NHEJ1Q9H9Q4 299 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 SPATS2LQ9NUQ6 558 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 CYP21A2P08686 494 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 H2AFZP0C0S5 128 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 PPP2R5EQ16537 467 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 H2AFVQ71UI9 128 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 N4BP2L2Q92802 583 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 C1orf112Q9NSG2 853 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 PPP1R9AQ9ULJ8 1098 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 GDF11O95390 407 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 E2F4Q16254 413 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
PCDHA9-201ENST00000378122 BFSP1Q12934 665 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 PPP2R5AQ15172 486 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 VSTM4Q8IW00 320 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 EXOC4Q96A65 974 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 DBNLQ9UJU6 430 aaKnown RBP13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 CCPG1Q9ULG6 757 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 ERBB4Q15303 1308 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 CUL4AQ13619 759 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 PGBD1Q96JS3 809 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 KIAA1024Q9UPX6 916 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 ATP8A1Q9Y2Q0 1164 aa13.02□□□□□ -0.32
PCDHA9-201ENST00000378122 ARID5BQ14865 1188 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms