RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DISC1Q9NRI5 854 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 DNM3Q9UQ16 869 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 A0A0U1RQJ8 604 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ARHGEF35A5YM69 484 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 KIF20AO95235 890 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 GRM4Q14833 912 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 TNIP1Q15025 636 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC122Q5T0U0 273 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 TMEM87AQ8NBN3 555 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ENGASEQ8NFI3 743 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ATRIPQ8WXE1 791 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 PANK4Q9NVE7 773 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 TRIM10Q9UDY6 481 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 KCPQ6ZWJ8 1503 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 KIAA0100Q14667 2235 aaKnown RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 YDJCA8MPS7 323 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 STXBP3O00186 592 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ZBTB5O15062 677 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 SHMT1P34896 483 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 IRX3P78415 501 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ARHGAP4P98171 946 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF543Q08ER8 600 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 IQCB1Q15051 598 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 SPECC1LQ69YQ0 1117 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 TOGARAM2Q6ZUX3 1019 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 TAB3Q8N5C8 712 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 MLKLQ8NB16 471 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 KIFC3Q9BVG8 833 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 COL1A1P02452 1464 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 A0A1W2PRG0 241 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 RSPH10B2B2RC85 870 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ORC4O43929 436 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 PPP6R2O75170 966 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 CSDE1O75534 798 aaKnown RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 RSPH10BP0C881 870 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 POLR2MP0CAP2 368 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 C16orf86Q6ZW13 317 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ERMNQ8TAM6 284 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 GLG1Q92896 1179 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF577Q9BSK1 485 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 RNF19AQ9NV58 838 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 HYOU1Q9Y4L1 999 aa9.01□□□□□ -0.97
CKAP2-203ENST00000378037 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
CKAP2-203ENST00000378037 BMP15O95972 392 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 GSDMDP57764 484 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 XKR9Q5GH70 373 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 NAA35Q5VZE5 725 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC102AQ96A19 550 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 VTI1AQ96AJ9 217 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 CNOT6LQ96LI5 555 aaKnown RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 TRIM31Q9BZY9 425 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 FAM198AQ9UFP1 575 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 WNT10BO00744 389 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 EXOC3O60645 756 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 SRGAP2O75044 1071 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 BMP6P22004 513 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 POLR2FP61218 127 aaKnown RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 KRT31Q15323 416 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 FAM26FQ5R3K3 315 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ODR4Q5SWX8 454 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 STRIP1Q5VSL9 837 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 CLEC17AQ6ZS10 378 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 SHISA4Q96DD7 197 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF512BQ96KM6 892 aaPredicted RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 TUBGCP2Q9BSJ2 902 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ELP3Q9H9T3 547 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 GOPCQ9HD26 462 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 RMND1Q9NWS8 449 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ANKFY1Q9P2R3 1169 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 MYO7AQ13402 2215 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 NFIBO00712 420 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 PMS1P54277 932 aaKnown RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 PSMC6P62333 389 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 BIRC3Q13489 604 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ZC2HC1CQ53FD0 456 aaPredicted RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 ATL3Q6DD88 541 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ARMCX5Q6P1M9 558 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF397Q8NF99 534 aaPredicted RBP9□□□□□ -0.97
CKAP2-203ENST00000378037 MAP3K14Q99558 947 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 GOLPH3Q9H4A6 298 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 TMOD4Q9NZQ9 345 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 HACL1Q9UJ83 578 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 ZNRF3Q9ULT6 936 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 LAMB1P07942 1786 aa9□□□□□ -0.97
CKAP2-203ENST00000378037 NF2P35240 595 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 JAG1P78504 1218 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ASPRV1Q53RT3 343 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 DACT2Q5SW24 774 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 SNRNP48Q6IEG0 339 aaKnown RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 TMEM179Q6ZVK1 233 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 MIER3Q7Z3K6 550 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms