RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 EN2P19622 333 aaPredicted RBP15.15■□□□□ 0.02
CKAP2-202ENST00000378034 ADCYAP1R1P41586 468 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 TTLL4Q14679 1199 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 DUSP28Q4G0W2 176 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 AIFM3Q96NN9 605 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 PHF20Q9BVI0 1012 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 ANO3Q9BYT9 981 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 WDR11Q9BZH6 1224 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 XPNPEP3Q9NQH7 507 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 PDGFCQ9NRA1 345 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 GNPTABQ3T906 1256 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 BLIDQ8IZY5 108 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
CKAP2-202ENST00000378034 GNEQ9Y223 722 aaKnown RBP15.15■□□□□ 0.02
CKAP2-202ENST00000378034 TGFB3P10600 412 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 SMPD1P17405 629 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 SREBF1P36956 1147 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 NKX3-2P78367 333 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 MRPS9P82933 396 aaKnown RBP15.14■□□□□ 0.01
CKAP2-202ENST00000378034 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 UPF3AQ9H1J1 476 aaKnown RBP15.14■□□□□ 0.01
CKAP2-202ENST00000378034 TMEM260Q9NX78 707 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
CKAP2-202ENST00000378034 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.13■□□□□ 0.01
CKAP2-202ENST00000378034 GJA9P57773 515 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 TRIM29Q14134 588 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 ANO1Q5XXA6 986 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 SEPT14Q6ZU15 432 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 RNF180Q86T96 592 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 SNX21Q969T3 373 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
CKAP2-202ENST00000378034 SYNRGQ9UMZ2 1314 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 DNM1LO00429 736 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 ADCY6O43306 1168 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 TXNP10599 105 aaKnown RBP15.13■□□□□ 0.01
CKAP2-202ENST00000378034 ICAM3P32942 547 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 RGS19P49795 217 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 CCDC62Q6P9F0 684 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 FAM184AQ8NB25 1140 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 AP5M1Q9H0R1 490 aa15.13■□□□□ 0.01
CKAP2-202ENST00000378034 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
CKAP2-202ENST00000378034 M0R2N6 131 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 MAFGO15525 162 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 ADAMTS4O75173 837 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 RGS20O76081 388 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 CYP3A4P08684 503 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 CST5P28325 142 aaPredicted RBP15.12■□□□□ 0.01
CKAP2-202ENST00000378034 NPY5RQ15761 445 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 TLK2Q86UE8 772 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 CDHR1Q96JP9 859 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 BRMS1Q9HCU9 246 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
CKAP2-202ENST00000378034 KCNJ14Q9UNX9 436 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
CKAP2-202ENST00000378034 FIBPO43427 364 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 CAPN15O75808 1086 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
CKAP2-202ENST00000378034 ARHGAP4P98171 946 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 CUL4AQ13619 759 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 LRRC41Q15345 812 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 UBE2Q1Q7Z7E8 422 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 KLHDC9Q8NEP7 349 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 CRYGNQ8WXF5 182 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 GPRASP2Q96D09 838 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 TSEN34Q9BSV6 310 aaKnown RBP15.11■□□□□ 0.01
CKAP2-202ENST00000378034 UBIAD1Q9Y5Z9 338 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 SPATA31C2B4DYI2 1134 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 KBTBD13C9JR72 458 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 ADAMTS3O15072 1205 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 DTNBO60941 627 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 PGK1P00558 417 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 MMP1P03956 469 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 KRT25Q7Z3Z0 450 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 PCSK9Q8NBP7 692 aaKnown RBP15.11■□□□□ 0.01
CKAP2-202ENST00000378034 LENG1Q96BZ8 264 aaPredicted RBP15.11■□□□□ 0.01
CKAP2-202ENST00000378034 C8orf76Q96K31 380 aa15.11■□□□□ 0.01
CKAP2-202ENST00000378034 K7ELQ4 463 aaPredicted RBP15.1■□□□□ 0.01
CKAP2-202ENST00000378034 DYNC1LI2O43237 492 aaPredicted RBP15.1■□□□□ 0.01
CKAP2-202ENST00000378034 ARIH2O95376 493 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 GH1P01241 217 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 C6orf222P0C671 652 aaPredicted RBP15.1■□□□□ 0.01
CKAP2-202ENST00000378034 KRT2P35908 639 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
CKAP2-202ENST00000378034 USP11P51784 963 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 KRT40Q6A162 431 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 NIPA1Q7RTP0 329 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 NECAB2Q7Z6G3 386 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 RASGRP4Q8TDF6 673 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 EMID1Q96A84 441 aaPredicted RBP15.1■□□□□ 0.01
CKAP2-202ENST00000378034 MXRA8Q9BRK3 442 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 RTEL1Q9NZ71 1219 aa15.1■□□□□ 0.01
CKAP2-202ENST00000378034 MYH7BA7E2Y1 1941 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 MOXD2PA6NHM9 499 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 ZEB2O60315 1214 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 ITGB5P18084 799 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms