RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 XRRA1Q6P2D8 792 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 VSIG10LQ86VR7 867 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 GLT8D2Q9H1C3 349 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 EHMT1Q9H9B1 1298 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 TMEM39AQ9NV64 488 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 ITGA7Q13683 1181 aa25.43■■□□□ 1.66
SRM-201ENST00000376957 ZSWIM6Q9HCJ5 1215 aa25.43■■□□□ 1.66
SRM-201ENST00000376957 V9GY48 417 aaPredicted RBP25.43■■□□□ 1.66
SRM-201ENST00000376957 SPDYE3A6NKU9 549 aa25.42■■□□□ 1.66
SRM-201ENST00000376957 MYL3P08590 195 aa25.42■■□□□ 1.66
SRM-201ENST00000376957 IRX5P78411 483 aaPredicted RBP25.42■■□□□ 1.66
SRM-201ENST00000376957 KIAA1217Q5T5P2 1943 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 RAG1P15918 1043 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 NAPAP54920 295 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 MDM2Q00987 491 aaPredicted RBP25.41■■□□□ 1.66
SRM-201ENST00000376957 LAMC2Q13753 1193 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 LY6KQ17RY6 165 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 PPP1R18Q6NYC8 613 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 CCDC62Q6P9F0 684 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 MTG1Q9BT17 334 aaPredicted RBP25.41■■□□□ 1.66
SRM-201ENST00000376957 AGXT2Q9BYV1 514 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 PDLIM7Q9NR12 457 aa25.41■■□□□ 1.66
SRM-201ENST00000376957 CNTNAP5Q8WYK1 1306 aa25.4■■□□□ 1.66
SRM-201ENST00000376957 hCG_1642624A0A1W2PR95 340 aa25.4■■□□□ 1.66
SRM-201ENST00000376957 A6NJR5 290 aa25.4■■□□□ 1.66
SRM-201ENST00000376957 CDK7P50613 346 aa25.4■■□□□ 1.66
SRM-201ENST00000376957 TMEM63BQ5T3F8 832 aa25.4■■□□□ 1.66
SRM-201ENST00000376957 USP17L6PQ6QN14 398 aa25.4■■□□□ 1.66
SRM-201ENST00000376957 DHX37Q8IY37 1157 aaKnown RBP25.4■■□□□ 1.66
SRM-201ENST00000376957 CCDC12Q8WUD4 166 aaPredicted RBP25.4■■□□□ 1.66
SRM-201ENST00000376957 DDX41Q9UJV9 622 aaKnown RBP25.4■■□□□ 1.66
SRM-201ENST00000376957 MEIS2O14770 477 aa25.39■■□□□ 1.66
SRM-201ENST00000376957 ANAPC15P60006 121 aa25.39■■□□□ 1.66
SRM-201ENST00000376957 PURAQ00577 322 aaKnown RBP25.39■■□□□ 1.66
SRM-201ENST00000376957 PRO3102Q9H379 93 aa25.39■■□□□ 1.66
SRM-201ENST00000376957 KIAA0355O15063 1070 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 ARIH2O95376 493 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 FAAP100Q0VG06 881 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 DGKDQ16760 1214 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 PCNX4Q63HM2 1172 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 CPLX2Q6PUV4 134 aaKnown RBP25.38■■□□□ 1.65
SRM-201ENST00000376957 NLRX1Q86UT6 975 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 TDHQ8IZJ6 230 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 COPS5Q92905 334 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 GPKOWQ92917 476 aaPredicted RBP eCLIP25.38■■□□□ 1.65
SRM-201ENST00000376957 EMID1Q96A84 441 aaPredicted RBP25.38■■□□□ 1.65
SRM-201ENST00000376957 PDRG1Q9NUG6 133 aa25.38■■□□□ 1.65
SRM-201ENST00000376957 FRMPD4Q14CM0 1322 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 SUPT20HL2P0C7V6 817 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 CDC27P30260 824 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 ADD1P35611 737 aaKnown RBP25.37■■□□□ 1.65
SRM-201ENST00000376957 ADCY7P51828 1080 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 CDHR1Q96JP9 859 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 MLXIPQ9HAP2 919 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 BARHL2Q9NY43 387 aa25.37■■□□□ 1.65
SRM-201ENST00000376957 NID2Q14112 1375 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 TRIM43BA6NCK2 446 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 CPLX1O14810 134 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 FOSP01100 380 aaPredicted RBP25.36■■□□□ 1.65
SRM-201ENST00000376957 PTGS1P23219 599 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 EVCP57679 992 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 FUT2Q10981 343 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 WWC2Q6AWC2 1192 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 TRIM22Q8IYM9 498 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 SLC43A3Q8NBI5 491 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 PPTC7Q8NI37 304 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 AFG1LQ8WV93 481 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 TRIM43Q96BQ3 446 aaPredicted RBP25.36■■□□□ 1.65
SRM-201ENST00000376957 KATNAL1Q9BW62 490 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 RIC8AQ9NPQ8 531 aa25.36■■□□□ 1.65
SRM-201ENST00000376957 FAM217BQ9NTX9 383 aaPredicted RBP25.36■■□□□ 1.65
SRM-201ENST00000376957 FIBPO43427 364 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 PDIA3P30101 505 aaKnown RBP25.35■■□□□ 1.65
SRM-201ENST00000376957 ARHGAP1Q07960 439 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 NEDD9Q14511 834 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 ANKRD1Q15327 319 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 PFKFB3Q16875 520 aaPredicted RBP25.35■■□□□ 1.65
SRM-201ENST00000376957 MCTP2Q6DN12 878 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 SH3RF1Q7Z6J0 888 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 FAM126BQ8IXS8 530 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 GIMAP8Q8ND71 665 aaPredicted RBP25.35■■□□□ 1.65
SRM-201ENST00000376957 BADQ92934 168 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 ZNF274Q96GC6 653 aaPredicted RBP25.35■■□□□ 1.65
SRM-201ENST00000376957 UPF3BQ9BZI7 483 aaKnown RBP25.35■■□□□ 1.65
SRM-201ENST00000376957 DNAH12Q6ZR08 3092 aa25.35■■□□□ 1.65
SRM-201ENST00000376957 SMCO2A6NFE2 343 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 PRPF3O43395 683 aaKnown RBP25.34■■□□□ 1.65
SRM-201ENST00000376957 MMP3P08254 477 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 SCG2P13521 617 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 PSMC6P62333 389 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 PTPN11Q06124 597 aaPredicted RBP25.34■■□□□ 1.65
SRM-201ENST00000376957 NFRKBQ6P4R8 1299 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 IL31RAQ8NI17 732 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 INPP4AQ96PE3 977 aaPredicted RBP25.34■■□□□ 1.65
SRM-201ENST00000376957 RNF26Q9BY78 433 aaPredicted RBP25.34■■□□□ 1.65
SRM-201ENST00000376957 RTEL1Q9NZ71 1219 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 PCDHA6Q9UN73 950 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 PCDHA8Q9Y5H6 950 aa25.34■■□□□ 1.65
SRM-201ENST00000376957 NOP56O00567 594 aaKnown RBP25.33■■□□□ 1.65
SRM-201ENST00000376957 PPFIA4O75335 1185 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms