RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TPTE2Q6XPS3 522 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 LRRC55Q6ZSA7 311 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 SND1Q7KZF4 910 aaKnown RBP eCLIP14.68□□□□□ -0.069e-7■□□□□ 8.5
ACTN1-202ENST00000376839 KCNK18Q7Z418 384 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 LARP4BQ92615 738 aaKnown RBP14.68□□□□□ -0.06
ACTN1-202ENST00000376839 FAM184BQ9ULE4 1060 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 DDX60LQ5H9U9 1706 aaKnown RBP14.67□□□□□ -0.06
ACTN1-202ENST00000376839 LCA5LO95447 670 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 BTDP43251 543 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 GSTO1P78417 241 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 C16orf86Q6ZW13 317 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 NEDD1Q8NHV4 660 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 FRMPD2Q68DX3 1309 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-202ENST00000376839 GOLGA6BA6NDN3 693 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 GFPT1Q06210 699 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-202ENST00000376839 ZNF572Q7Z3I7 529 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-202ENST00000376839 GUF1Q8N442 669 aaKnown RBP14.67□□□□□ -0.06
ACTN1-202ENST00000376839 COA7Q96BR5 231 aa14.67□□□□□ -0.06
ACTN1-202ENST00000376839 TNRC6CQ9HCJ0 1690 aaKnown RBP14.67□□□□□ -0.06
ACTN1-202ENST00000376839 MAGEA1P43355 309 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 IQCDQ96DY2 449 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 MTMR8Q96EF0 704 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 STK17AQ9UEE5 414 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 COL24A1Q17RW2 1714 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 PVALEFA0A1B0GWK0 134 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 GNPATO15228 680 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 ZPR1O75312 459 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 SKIDA1Q1XH10 827 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 TMC4Q7Z404 712 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 TEX11Q8IYF3 940 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 CDK5RAP3Q96JB5 506 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 HYOU1Q9Y4L1 999 aa14.66□□□□□ -0.06
ACTN1-202ENST00000376839 SLC1A4P43007 532 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■■■□ 21.1
ACTN1-202ENST00000376839 RASSF7Q02833 373 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 ASTE1Q2TB18 679 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-202ENST00000376839 HAUS3Q68CZ6 603 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 CCDC70Q6NSX1 233 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 PDXDC1Q6P996 788 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 SNX29Q8TEQ0 813 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 RAD54LQ92698 747 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 DDX12PQ92771 950 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 GJA10Q969M2 543 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 CDK5RAP2Q96SN8 1893 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 BUB1O43683 1085 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 PRLRP16471 622 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 KCNMA1Q12791 1236 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 ECM1Q16610 540 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-202ENST00000376839 ALS2CR12Q96Q35 445 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 TLR10Q9BXR5 811 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 ZNF287Q9HBT7 754 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 ESYT2A0FGR8 921 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 GOLGA6CA6NDK9 693 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 PPFIA4O75335 1185 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 RPS6KA4O75676 772 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 GOLGA6DP0CG33 693 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 TCP1P17987 556 aaKnown RBP14.65□□□□□ -0.06
ACTN1-202ENST00000376839 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 ITIH3Q06033 890 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 EHHADHQ08426 723 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 HGSNATQ68CP4 663 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 TSEN2Q8NCE0 465 aaKnown RBP14.65□□□□□ -0.06
ACTN1-202ENST00000376839 FAM76AQ8TAV0 307 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 MS4A14Q96JA4 679 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 TANGO6Q9C0B7 1094 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 NLRC4Q9NPP4 1024 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 GOLGA6AQ9NYA3 693 aa14.65□□□□□ -0.06
ACTN1-202ENST00000376839 LDHCP07864 332 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 EHD4Q9H223 541 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 RIOX1Q9H6W3 641 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
ACTN1-202ENST00000376839 LEMD3Q9Y2U8 911 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 ABCB11O95342 1321 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 RGL2O15211 777 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 PJA2O43164 708 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 SHOX2O60902 331 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-202ENST00000376839 PDHBP11177 359 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 APBA1Q02410 837 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 ORC2Q13416 577 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-202ENST00000376839 TMEM266Q2M3C6 531 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 CCDC181Q5TID7 509 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 KLHDC7AQ5VTJ3 777 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 BARGINQ6ZT62 677 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 ZNF804AQ7Z570 1209 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 CLEC10AQ8IUN9 316 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 LRRC47Q8N1G4 583 aaKnown RBP14.64□□□□□ -0.07
ACTN1-202ENST00000376839 FGFBP2Q9BYJ0 223 aa14.64□□□□□ -0.07
ACTN1-202ENST00000376839 TLR2O60603 784 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 ADCY7P51828 1080 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 GRAPQ13588 217 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 TMEM119Q4V9L6 283 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 TDRD12Q587J7 1177 aaKnown RBP14.63□□□□□ -0.07
ACTN1-202ENST00000376839 GRAPLQ8TC17 118 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-202ENST00000376839 STIM2Q9P246 746 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 FGFR1OPO95684 399 aaKnown RBP14.63□□□□□ -0.07
ACTN1-202ENST00000376839 TNNI2P48788 182 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms